The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000210l.5 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
| PMEG.utg000210l.6 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000210l.7 | GLUTAREDOXIN |
| PMEG.utg000210l.8 | |
| PMEG.utg000210l.9 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000211l.1 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| PMEG.utg000211l.10 | |
| PMEG.utg000211l.11 | |
| PMEG.utg000211l.2 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| PMEG.utg000211l.3 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| PMEG.utg000211l.4 | |
| PMEG.utg000211l.5 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000211l.7 | DNAJ HOMOLOG SUBFAMILY C MEMBER 25 |
| PMEG.utg000211l.8 | MOLTING PROTEIN MLT-4 |
| PMEG.utg000211l.9 | |
| PMEG.utg000213l.2 | ORNITHINE DECARBOXYLASE ANTIZYME |
| PMEG.utg000213l.3 | |
| PMEG.utg000213l.4 | TUDOR DOMAIN CONTAINING PROTEIN |
| PMEG.utg000213l.5 | ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER |
| PMEG.utg000213l.6 | SOLUTE CARRIER FAMILY 25 MEMBER 44 |
| PMEG.utg000213l.7 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
| PMEG.utg000214l.1 | |
| PMEG.utg000214l.10 | MUCOLIPIN |
| PMEG.utg000214l.11 | CORDON-BLEU |
| PMEG.utg000214l.2 | |
| PMEG.utg000214l.3 | MITOGEN-ACTIVATED KINASE KINASE KINASE |
| PMEG.utg000214l.4 | SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 |
| PMEG.utg000214l.5 | TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000214l.6 | UPF0538 FAMILY MEMBER |
| PMEG.utg000214l.7 | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 |
| PMEG.utg000214l.8 | BETA-CAROTENE DIOXYGENASE |
| PMEG.utg000214l.9 | BETA-CAROTENE DIOXYGENASE |
| PMEG.utg000215l.1 | O-ACYLTRANSFERASE |
| PMEG.utg000215l.2 | O-ACYLTRANSFERASE |
| PMEG.utg000215l.3 | LOC100145250 PROTEIN |
| PMEG.utg000215l.4 | METABOTROPIC GLUTAMATE RECEPTOR |
| PMEG.utg000215l.5 | PBS LYASE HEAT-LIKE PROTEIN |
| PMEG.utg000215l.7 | PBS LYASE HEAT-LIKE PROTEIN |
| PMEG.utg000216l.1 | |
| PMEG.utg000216l.10 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| PMEG.utg000216l.11 | |
| PMEG.utg000216l.15 | GAMMA-SECRETASE SUBUNIT PEN-2 |
| PMEG.utg000216l.16 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
| PMEG.utg000216l.17 | |
| PMEG.utg000216l.18 | SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE |
| PMEG.utg000216l.19 | |
| PMEG.utg000216l.2 | |
| PMEG.utg000216l.20 | VERTNIN |
| PMEG.utg000216l.21 | UNCHARACTERIZED |
| PMEG.utg000216l.22 | UNCHARACTERIZED |
