The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000203l.2 | ZINC FINGER PROTEIN |
| PMEG.utg000203l.3 | VESICULAR MANNOSE-BINDING LECTIN |
| PMEG.utg000204l.1 | |
| PMEG.utg000204l.2 | TELOMERIC REPEAT-BINDING FACTOR 2 TERF2 |
| PMEG.utg000204l.3 | UNCHARACTERIZED |
| PMEG.utg000204l.4 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| PMEG.utg000204l.5 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED |
| PMEG.utg000204l.6 | TETRASPANIN |
| PMEG.utg000205l.1 | I-KAPPA-B-LIKE PROTEIN IKBL |
| PMEG.utg000205l.10 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| PMEG.utg000205l.11 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B |
| PMEG.utg000205l.12 | PROTEIN ABHD14B-LIKE |
| PMEG.utg000205l.13 | ZGC:101858 |
| PMEG.utg000205l.14 | APOLIPOPROTEIN D |
| PMEG.utg000205l.15 | RAP GTPASE-ACTIVATING PROTEIN |
| PMEG.utg000205l.16 | |
| PMEG.utg000205l.2 | RNA HELICASE |
| PMEG.utg000205l.3 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| PMEG.utg000205l.4 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| PMEG.utg000205l.5 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| PMEG.utg000205l.6 | ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 19 |
| PMEG.utg000205l.7 | SERINE-THREONINE PROTEIN KINASE |
| PMEG.utg000205l.8 | |
| PMEG.utg000205l.9 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| PMEG.utg000206l.1 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| PMEG.utg000206l.10 | PROTEIN PHOSPHATASE 2C |
| PMEG.utg000206l.11 | PRESEQUENCE PROTEASE |
| PMEG.utg000206l.12 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| PMEG.utg000206l.13 | WD REPEAT-CONTAINING PROTEIN 97 |
| PMEG.utg000206l.14 | |
| PMEG.utg000206l.15 | MITOCHONDRIAL INNER MEMBRANE PROTEASE |
| PMEG.utg000206l.16 | TROPONIN |
| PMEG.utg000206l.2 | |
| PMEG.utg000206l.3 | |
| PMEG.utg000206l.4 | MODULATOR OF FTSH PROTEASE HFLC |
| PMEG.utg000206l.5 | CARDIOACCELERATORY PEPTIDE RECEPTOR-RELATED |
| PMEG.utg000206l.6 | RAS-RELATED PROTEIN RAB |
| PMEG.utg000206l.7 | - |
| PMEG.utg000206l.8 | - |
| PMEG.utg000206l.9 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
| PMEG.utg000207l.1 | METABOTROPIC GLUTAMATE RECEPTOR |
| PMEG.utg000207l.10 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000207l.11 | |
| PMEG.utg000207l.12 | DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59 |
| PMEG.utg000207l.13 | RNA POLYMERASE II-ASSOCIATED PROTEIN 3 |
| PMEG.utg000207l.14 | 39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED |
| PMEG.utg000207l.15 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| PMEG.utg000207l.16 | DYNAMIN |
| PMEG.utg000207l.17 | SAM (S-ADENOSYL METHIONINE) TRANSPORTER |
| PMEG.utg000207l.18 |
