The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000198l.49 | UNCHARACTERIZED |
| PMEG.utg000198l.5 | SERINE-THREONINE PROTEIN KINASE |
| PMEG.utg000198l.50 | 39S RIBOSOMAL PROTEIN L52, MITOCHONDRIAL |
| PMEG.utg000198l.51 | ALANYL-TRNA SYNTHETASE |
| PMEG.utg000198l.52 | CALCIUM-TRANSPORTING ATPASE |
| PMEG.utg000198l.53 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1 |
| PMEG.utg000198l.54 | RIBONUCLEASE P PROTEIN SUBUNIT P40 |
| PMEG.utg000198l.55 | EXPRESSED PROTEIN |
| PMEG.utg000198l.56 | |
| PMEG.utg000198l.57 | RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATED |
| PMEG.utg000198l.58 | OXA1 |
| PMEG.utg000198l.59 | OXA1 |
| PMEG.utg000198l.6 | PHOSPHATIDYLSERINE DECARBOXYLASE |
| PMEG.utg000198l.60 | MULTIDRUG RESISTANCE PROTEIN |
| PMEG.utg000198l.61 | TETRATRICOPEPTIDE REPEAT PROTEIN 5 |
| PMEG.utg000198l.62 | N-MYC DOWNSTREAM REGULATED |
| PMEG.utg000198l.63 | SELECTIN LIGAND RELATED |
| PMEG.utg000198l.64 | |
| PMEG.utg000198l.65 | TRANSPORT PROTEIN TRAPP |
| PMEG.utg000198l.7 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| PMEG.utg000198l.8 | AMINO ACID TRANSPORTER |
| PMEG.utg000198l.9 | AMINO ACID TRANSPORTER |
| PMEG.utg000199l.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 13 |
| PMEG.utg000199l.10 | LIM/HOMEOBOX PROTEIN LHX |
| PMEG.utg000199l.11 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| PMEG.utg000199l.12 | TRANSMEMBRANE PROTEIN 2-RELATED |
| PMEG.utg000199l.13 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000199l.14 | SARCOSINE DEHYDROGENASE-RELATED |
| PMEG.utg000199l.15 | COLLAGEN ALPHA |
| PMEG.utg000199l.16 | COLLAGEN ALPHA |
| PMEG.utg000199l.17 | |
| PMEG.utg000199l.18 | ANKYRIN REPEAT-CONTAINING |
| PMEG.utg000199l.19 | SPERMATID WD-REPEAT PROTEIN |
| PMEG.utg000199l.2 | - |
| PMEG.utg000199l.20 | LD33695P |
| PMEG.utg000199l.21 | PRE-MRNA SPLICING FACTOR |
| PMEG.utg000199l.22 | DOPAMINE BETA HYDROXYLASE RELATED |
| PMEG.utg000199l.23 | |
| PMEG.utg000199l.24 | DIMETHYLANILINE MONOOXYGENASE |
| PMEG.utg000199l.25 | HISTONE-LYSINE N-METHYLTRANSFERASE SMYD |
| PMEG.utg000199l.26 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| PMEG.utg000199l.27 | |
| PMEG.utg000199l.28 | C-TYPE LECTIN SUPERFAMILY MEMBER |
| PMEG.utg000199l.29 | MULTICOPPER OXIDASE-RELATED |
| PMEG.utg000199l.3 | PROTEIN SIDEKICK |
| PMEG.utg000199l.4 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000199l.5 | CULLIN |
| PMEG.utg000199l.6 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| PMEG.utg000199l.7 | METHIONINE SULFOXIDE REDUCTASE |
| PMEG.utg000199l.9 | DIMETHYLANILINE MONOOXYGENASE |
