The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000192l.53 | MITOCHONDRIA-EATING PROTEIN-RELATED |
PMEG.utg000192l.54 | NUCLEOPORIN |
PMEG.utg000192l.55 | CADHERIN-23 |
PMEG.utg000192l.56 | SPARTIN |
PMEG.utg000192l.57 | ORGANIC SOLUTE TRANSPORTER-RELATED |
PMEG.utg000192l.58 | |
PMEG.utg000192l.59 | |
PMEG.utg000192l.6 | |
PMEG.utg000192l.60 | CENTROSOMAL PROTEIN CEP135 |
PMEG.utg000192l.61 | MYOTUBULARIN-RELATED |
PMEG.utg000192l.62 | GRB2-ASSOCIATED-BINDING PROTEIN |
PMEG.utg000192l.63 | CALPAIN |
PMEG.utg000192l.64 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
PMEG.utg000192l.65 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000192l.7 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
PMEG.utg000192l.8 | NEDD4-BINDING PROTEIN 2 |
PMEG.utg000192l.9 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED |
PMEG.utg000193l.1 | |
PMEG.utg000193l.10 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
PMEG.utg000193l.11 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
PMEG.utg000193l.12 | SMALL INTEGRAL MEMBRANE PROTEIN 15 |
PMEG.utg000193l.13 | ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2 |
PMEG.utg000193l.14 | SCAVENGER RECEPTOR CLASS F |
PMEG.utg000193l.15 | |
PMEG.utg000193l.16 | |
PMEG.utg000193l.17 | |
PMEG.utg000193l.18 | |
PMEG.utg000193l.19 | |
PMEG.utg000193l.2 | ADHESION G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000193l.20 | RHO GTPASE-ACTIVATING PROTEIN 100F |
PMEG.utg000193l.3 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
PMEG.utg000193l.4 | BAP28 |
PMEG.utg000193l.5 | BAP28 |
PMEG.utg000193l.6 | |
PMEG.utg000193l.7 | DEP DOMAIN PROTEIN |
PMEG.utg000193l.8 | SISTER CHROMATID COHESION PROTEIN DCC1-RELATED |
PMEG.utg000193l.9 | CEREBELLIN-RELATED |
PMEG.utg000194l.1 | ROLLING PEBBLES, ISOFORM B |
PMEG.utg000194l.10 | YEATS DOMAIN |
PMEG.utg000194l.11 | LITHOSTATHINE |
PMEG.utg000194l.13 | THIOESTERASE |
PMEG.utg000194l.14 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000194l.15 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
PMEG.utg000194l.16 | ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL |
PMEG.utg000194l.17 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
PMEG.utg000194l.18 | VACUOLAR ATP SYNTHASE SUBUNIT F |
PMEG.utg000194l.19 | PROTEIN C7ORF21 |
PMEG.utg000194l.2 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
PMEG.utg000194l.20 | TRANSCRIPTION INTERMEDIARY FACTOR |
PMEG.utg000194l.21 | LYMPHOID-SPECIFIC HELICASE |