The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000176l.48 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| PMEG.utg000176l.49 | CLATHRIN HEAVY CHAIN RELATED |
| PMEG.utg000176l.5 | PLASMINOGEN-RELATED |
| PMEG.utg000176l.50 | 26S PROTEASOME REGULATORY SUBUNIT |
| PMEG.utg000176l.51 | |
| PMEG.utg000176l.52 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
| PMEG.utg000176l.53 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000176l.54 | |
| PMEG.utg000176l.55 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
| PMEG.utg000176l.56 | EXPRESSED PROTEIN |
| PMEG.utg000176l.6 | |
| PMEG.utg000176l.7 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| PMEG.utg000176l.8 | |
| PMEG.utg000176l.9 | CARNITINE O-ACYLTRANSFERASE |
| PMEG.utg000178l.1 | TRANSLATION ELONGATION FACTOR-RELATED |
| PMEG.utg000179l.1 | REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 |
| PMEG.utg000179l.10 | ALPHA-1,4 POLYGALACTOSAMINIDASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G07890)-RELATED |
| PMEG.utg000179l.11 | DNA REPLICATION FACTOR CDT1 |
| PMEG.utg000179l.12 | RAB11-BINDING PROTEIN RELCH |
| PMEG.utg000179l.13 | HEAT SHOCK REGULATED 2 |
| PMEG.utg000179l.14 | F-BOX ONLY PROTEIN 15 |
| PMEG.utg000179l.15 | ALKYL/ARYL-SULFATASE |
| PMEG.utg000179l.16 | CARBOXYLIC ESTER HYDROLASE |
| PMEG.utg000179l.17 | RAN BINDING PROTEIN 9-RELATED |
| PMEG.utg000179l.18 | TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1 |
| PMEG.utg000179l.19 | - |
| PMEG.utg000179l.2 | 40S RIBOSOMAL PROTEIN S3A |
| PMEG.utg000179l.20 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
| PMEG.utg000179l.21 | LITHOSTATHINE |
| PMEG.utg000179l.22 | |
| PMEG.utg000179l.23 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOG |
| PMEG.utg000179l.24 | AMINO ACID TRANSPORTER |
| PMEG.utg000179l.25 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| PMEG.utg000179l.26 | AMINO ACID TRANSPORTER |
| PMEG.utg000179l.27 | GUANINE NUCLEOTIDE EXCHANGE FACTOR MSS4 |
| PMEG.utg000179l.28 | NEFA-INTERACTING NUCLEAR PROTEIN NIP30 |
| PMEG.utg000179l.29 | FANCONI ANEMIA GROUP A PROTEIN |
| PMEG.utg000179l.3 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 61F |
| PMEG.utg000179l.31 | ADAPTIN, ALPHA/GAMMA/EPSILON |
| PMEG.utg000179l.32 | SUGAR NUCLEOTIDE EPIMERASE RELATED |
| PMEG.utg000179l.33 | E3 UBIQUITIN-PROTEIN LIGASE RNF8 |
| PMEG.utg000179l.34 | PIG-M MANNOSYLTRANSFERASE |
| PMEG.utg000179l.35 | |
| PMEG.utg000179l.36 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| PMEG.utg000179l.37 | SPIRE |
| PMEG.utg000179l.38 | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 |
| PMEG.utg000179l.39 | DED DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000179l.4 | UNCHARACTERIZED |
| PMEG.utg000179l.40 | ATP DEPENDENT LON PROTEASE FAMILY MEMBER |
| PMEG.utg000179l.41 | IMPORTIN BETA |
