The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000167l.48 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
| PMEG.utg000167l.49 | GLUTAMATE DEHYDROGENASE |
| PMEG.utg000167l.5 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
| PMEG.utg000167l.50 | CARNITINE O-ACYLTRANSFERASE |
| PMEG.utg000167l.51 | |
| PMEG.utg000167l.52 | |
| PMEG.utg000167l.53 | UNCHARACTERIZED |
| PMEG.utg000167l.54 | |
| PMEG.utg000167l.55 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
| PMEG.utg000167l.56 | PHOSPHOMANNOMUTASE |
| PMEG.utg000167l.57 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
| PMEG.utg000167l.58 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
| PMEG.utg000167l.59 | |
| PMEG.utg000167l.6 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| PMEG.utg000167l.60 | UPF0193 PROTEIN EVG1 |
| PMEG.utg000167l.61 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000167l.62 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000167l.63 | RE74312P |
| PMEG.utg000167l.64 | ALPHA-L-FUCOSIDASE |
| PMEG.utg000167l.65 | TESTIS-EXPRESSED PROTEIN 47 |
| PMEG.utg000167l.66 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000167l.67 | UNCHARACTERIZED |
| PMEG.utg000167l.68 | DNA-DIRECTED RNA POLYMERASE II, III |
| PMEG.utg000167l.69 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| PMEG.utg000167l.7 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| PMEG.utg000167l.70 | NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED |
| PMEG.utg000167l.71 | NUCLEAR MOVEMENT PROTEIN NUDC |
| PMEG.utg000167l.72 | 60S RIBOSOMAL PROTEIN L10 |
| PMEG.utg000167l.73 | SORTING NEXIN-29-RELATED |
| PMEG.utg000167l.74 | JOSEPHIN 1, 2 |
| PMEG.utg000167l.75 | ELONGATION FACTOR TU-RELATED |
| PMEG.utg000167l.76 | AMINOTRANSFERASE |
| PMEG.utg000167l.77 | AMINOTRANSFERASE |
| PMEG.utg000167l.78 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| PMEG.utg000167l.79 | UNCHARACTERIZED |
| PMEG.utg000167l.8 | POLYCYSTIN-1 |
| PMEG.utg000167l.80 | |
| PMEG.utg000167l.81 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B |
| PMEG.utg000167l.82 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000167l.83 | TRANSMEMBRANE PROTEIN 220 |
| PMEG.utg000167l.84 | |
| PMEG.utg000167l.85 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11 |
| PMEG.utg000167l.86 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
| PMEG.utg000167l.87 | UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 |
| PMEG.utg000167l.88 | IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED |
| PMEG.utg000167l.89 | THIOREDOXIN |
| PMEG.utg000167l.9 | PROTEIN HID1 |
| PMEG.utg000167l.90 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| PMEG.utg000167l.91 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| PMEG.utg000167l.92 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 |
