About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000166l.69
PMEG.utg000166l.7AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
PMEG.utg000166l.70N-ACETYLGALACTOSAMINYLTRANSFERASE
PMEG.utg000166l.71N-ACETYLGALACTOSAMINYLTRANSFERASE
PMEG.utg000166l.72CYSTEINE-RICH SECRETORY PROTEIN-RELATED
PMEG.utg000166l.73
PMEG.utg000166l.74
PMEG.utg000166l.75PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED
PMEG.utg000166l.76SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
PMEG.utg000166l.77FACTOR VIII-ASSOCIATED GENE 1
PMEG.utg000166l.78GAMMA GLUTAMYL TRANSPEPTIDASE
PMEG.utg000166l.79
PMEG.utg000166l.8CADHERIN-87A
PMEG.utg000166l.80GUANINE NUCLEOTIDE EXCHANGE FACTOR
PMEG.utg000166l.81NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
PMEG.utg000166l.82CARBOHYDRATE SULFOTRANSFERASE
PMEG.utg000166l.83DNA LIGASE 1/3 FAMILY MEMBER
PMEG.utg000166l.84EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
PMEG.utg000166l.85
PMEG.utg000166l.86ORGANIC SOLUTE TRANSPORTER-RELATED
PMEG.utg000166l.87ET TRANSLATION PRODUCT-RELATED
PMEG.utg000166l.88SNARE PROTEINS
PMEG.utg000166l.89AMINO ACID TRANSPORTER
PMEG.utg000166l.9UNCHARACTERIZED
PMEG.utg000166l.90RNA-BINDING ASCH DOMAIN PROTEIN
PMEG.utg000166l.91ENDO BETA N-ACETYLGLUCOSAMINIDASE
PMEG.utg000166l.92ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN
PMEG.utg000166l.93UNCHARACTERIZED
PMEG.utg000166l.94
PMEG.utg000166l.95IONOTROPIC GLUTAMATE RECEPTOR
PMEG.utg000166l.96TRANSMEMBRANE CHANNEL-RELATED
PMEG.utg000166l.97ATP-DEPENDENT RNA HELICASE DBP3
PMEG.utg000166l.98EUKARYOTIC TRANSLATION INITIATION FACTOR 3
PMEG.utg000166l.99ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
PMEG.utg000167l.1ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
PMEG.utg000167l.10ANKYRIN REPEAT CONTAINING
PMEG.utg000167l.100ALPHA-MANNOSIDASE
PMEG.utg000167l.101ALPHA-MANNOSIDASE
PMEG.utg000167l.102NUCLEAR FACTOR NF-KAPPA-B PROTEIN
PMEG.utg000167l.103UNCHARACTERIZED
PMEG.utg000167l.104LETHAL 2 GIANT LARVAE PROTEIN
PMEG.utg000167l.105RAB11-FAMILY INTERACTING PROTEIN
PMEG.utg000167l.106SULFOTRANSFERASE SULT
PMEG.utg000167l.107UNNAMED PRODUCT
PMEG.utg000167l.108SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
PMEG.utg000167l.109SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
PMEG.utg000167l.11FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
PMEG.utg000167l.110NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
PMEG.utg000167l.111PEPTIDE CHAIN RELEASE FACTOR
PMEG.utg000167l.112RIBOSOMAL PROTEIN S6 KINASE
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