The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000166l.69 | |
PMEG.utg000166l.7 | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED |
PMEG.utg000166l.70 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
PMEG.utg000166l.71 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
PMEG.utg000166l.72 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
PMEG.utg000166l.73 | |
PMEG.utg000166l.74 | |
PMEG.utg000166l.75 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
PMEG.utg000166l.76 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
PMEG.utg000166l.77 | FACTOR VIII-ASSOCIATED GENE 1 |
PMEG.utg000166l.78 | GAMMA GLUTAMYL TRANSPEPTIDASE |
PMEG.utg000166l.79 | |
PMEG.utg000166l.8 | CADHERIN-87A |
PMEG.utg000166l.80 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
PMEG.utg000166l.81 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000166l.82 | CARBOHYDRATE SULFOTRANSFERASE |
PMEG.utg000166l.83 | DNA LIGASE 1/3 FAMILY MEMBER |
PMEG.utg000166l.84 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
PMEG.utg000166l.85 | |
PMEG.utg000166l.86 | ORGANIC SOLUTE TRANSPORTER-RELATED |
PMEG.utg000166l.87 | ET TRANSLATION PRODUCT-RELATED |
PMEG.utg000166l.88 | SNARE PROTEINS |
PMEG.utg000166l.89 | AMINO ACID TRANSPORTER |
PMEG.utg000166l.9 | UNCHARACTERIZED |
PMEG.utg000166l.90 | RNA-BINDING ASCH DOMAIN PROTEIN |
PMEG.utg000166l.91 | ENDO BETA N-ACETYLGLUCOSAMINIDASE |
PMEG.utg000166l.92 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
PMEG.utg000166l.93 | UNCHARACTERIZED |
PMEG.utg000166l.94 | |
PMEG.utg000166l.95 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000166l.96 | TRANSMEMBRANE CHANNEL-RELATED |
PMEG.utg000166l.97 | ATP-DEPENDENT RNA HELICASE DBP3 |
PMEG.utg000166l.98 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 |
PMEG.utg000166l.99 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000167l.1 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
PMEG.utg000167l.10 | ANKYRIN REPEAT CONTAINING |
PMEG.utg000167l.100 | ALPHA-MANNOSIDASE |
PMEG.utg000167l.101 | ALPHA-MANNOSIDASE |
PMEG.utg000167l.102 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
PMEG.utg000167l.103 | UNCHARACTERIZED |
PMEG.utg000167l.104 | LETHAL 2 GIANT LARVAE PROTEIN |
PMEG.utg000167l.105 | RAB11-FAMILY INTERACTING PROTEIN |
PMEG.utg000167l.106 | SULFOTRANSFERASE SULT |
PMEG.utg000167l.107 | UNNAMED PRODUCT |
PMEG.utg000167l.108 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
PMEG.utg000167l.109 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
PMEG.utg000167l.11 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
PMEG.utg000167l.110 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
PMEG.utg000167l.111 | PEPTIDE CHAIN RELEASE FACTOR |
PMEG.utg000167l.112 | RIBOSOMAL PROTEIN S6 KINASE |