The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000167l.113 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
PMEG.utg000167l.114 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
PMEG.utg000167l.115 | RAS-RELATED PROTEIN RAB |
PMEG.utg000167l.116 | |
PMEG.utg000167l.117 | RNA AND EXPORT FACTOR BINDING PROTEIN |
PMEG.utg000167l.118 | LP21163P |
PMEG.utg000167l.119 | ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR |
PMEG.utg000167l.12 | METHIONINE AMINOPEPTIDASE |
PMEG.utg000167l.120 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
PMEG.utg000167l.121 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
PMEG.utg000167l.122 | AMSH-LIKE PROTEASE |
PMEG.utg000167l.123 | FAM13 |
PMEG.utg000167l.124 | L-THREONINE 3-DEHYDROGENASE |
PMEG.utg000167l.125 | CALPAIN |
PMEG.utg000167l.126 | CYTOCHROME P450 FAMILY 4 |
PMEG.utg000167l.127 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
PMEG.utg000167l.128 | METALLOPROTEASE |
PMEG.utg000167l.129 | N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT |
PMEG.utg000167l.13 | CHITINASE |
PMEG.utg000167l.130 | ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE |
PMEG.utg000167l.131 | COENZYME Q10 BIOSYNTHESIS PROTEIN 7 |
PMEG.utg000167l.132 | |
PMEG.utg000167l.133 | |
PMEG.utg000167l.134 | RIBOSOME BIOGENESIS PROTEIN |
PMEG.utg000167l.135 | - |
PMEG.utg000167l.136 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
PMEG.utg000167l.137 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
PMEG.utg000167l.138 | TRANSDUCIN BETA-LIKE 3 |
PMEG.utg000167l.139 | TRNA-DIHYDROURIDINE SYNTHASE |
PMEG.utg000167l.14 | CHITINASE |
PMEG.utg000167l.140 | VACUOLAR PROTON ATPASES |
PMEG.utg000167l.141 | 26S PROTESOME SUBUNIT 6 |
PMEG.utg000167l.142 | HISTONE H1 |
PMEG.utg000167l.143 | LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN |
PMEG.utg000167l.144 | SPARC OSTEONECTIN |
PMEG.utg000167l.145 | - |
PMEG.utg000167l.146 | - |
PMEG.utg000167l.147 | - |
PMEG.utg000167l.148 | MIP08469P |
PMEG.utg000167l.149 | UNCHARACTERIZED |
PMEG.utg000167l.15 | CHITINASE |
PMEG.utg000167l.150 | E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBER |
PMEG.utg000167l.151 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
PMEG.utg000167l.152 | PHENAZINE BIOSYNTHESIS PROTEIN |
PMEG.utg000167l.153 | AGAP001705-PA |
PMEG.utg000167l.154 | SOLUTE CARRIER FAMILY 25 |
PMEG.utg000167l.155 | |
PMEG.utg000167l.156 | PROTEASE M14 CARBOXYPEPTIDASE |
PMEG.utg000167l.157 | MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1 |
PMEG.utg000167l.158 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |