About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000167l.113TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
PMEG.utg000167l.114MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
PMEG.utg000167l.115RAS-RELATED PROTEIN RAB
PMEG.utg000167l.116
PMEG.utg000167l.117RNA AND EXPORT FACTOR BINDING PROTEIN
PMEG.utg000167l.118LP21163P
PMEG.utg000167l.119ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR
PMEG.utg000167l.12METHIONINE AMINOPEPTIDASE
PMEG.utg000167l.120PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
PMEG.utg000167l.121VHS DOMAIN CONTAINING PROTEIN FAMILY
PMEG.utg000167l.122AMSH-LIKE PROTEASE
PMEG.utg000167l.123FAM13
PMEG.utg000167l.124L-THREONINE 3-DEHYDROGENASE
PMEG.utg000167l.125CALPAIN
PMEG.utg000167l.126CYTOCHROME P450 FAMILY 4
PMEG.utg000167l.127BRCA1-ASSOCIATED ATM ACTIVATOR 1
PMEG.utg000167l.128METALLOPROTEASE
PMEG.utg000167l.129N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT
PMEG.utg000167l.13CHITINASE
PMEG.utg000167l.130ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
PMEG.utg000167l.131COENZYME Q10 BIOSYNTHESIS PROTEIN 7
PMEG.utg000167l.132
PMEG.utg000167l.133
PMEG.utg000167l.134RIBOSOME BIOGENESIS PROTEIN
PMEG.utg000167l.135-
PMEG.utg000167l.136SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
PMEG.utg000167l.137ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
PMEG.utg000167l.138TRANSDUCIN BETA-LIKE 3
PMEG.utg000167l.139TRNA-DIHYDROURIDINE SYNTHASE
PMEG.utg000167l.14CHITINASE
PMEG.utg000167l.140VACUOLAR PROTON ATPASES
PMEG.utg000167l.14126S PROTESOME SUBUNIT 6
PMEG.utg000167l.142HISTONE H1
PMEG.utg000167l.143LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN
PMEG.utg000167l.144SPARC OSTEONECTIN
PMEG.utg000167l.145-
PMEG.utg000167l.146-
PMEG.utg000167l.147-
PMEG.utg000167l.148MIP08469P
PMEG.utg000167l.149UNCHARACTERIZED
PMEG.utg000167l.15CHITINASE
PMEG.utg000167l.150E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBER
PMEG.utg000167l.151SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
PMEG.utg000167l.152PHENAZINE BIOSYNTHESIS PROTEIN
PMEG.utg000167l.153AGAP001705-PA
PMEG.utg000167l.154SOLUTE CARRIER FAMILY 25
PMEG.utg000167l.155
PMEG.utg000167l.156PROTEASE M14 CARBOXYPEPTIDASE
PMEG.utg000167l.157MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
PMEG.utg000167l.158RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20
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