The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000166l.295 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| PMEG.utg000166l.296 | ACYL-COA DEHYDROGENASE |
| PMEG.utg000166l.297 | MYOSIN |
| PMEG.utg000166l.298 | DYNACTIN P62 SUBUNIT |
| PMEG.utg000166l.299 | CHROMOSOME ALIGNMENT-MAINTAINING PHOSPHOPROTEIN 1 |
| PMEG.utg000166l.3 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| PMEG.utg000166l.30 | RAD50-INTERACTING PROTEIN 1 RINT-1 |
| PMEG.utg000166l.300 | TGF-BETA FAMILY |
| PMEG.utg000166l.301 | GERM CELL-LESS PROTEIN |
| PMEG.utg000166l.31 | MITOCHONDRIAL GLYCINE TRANSPORTER |
| PMEG.utg000166l.32 | PR DOMAIN ZINC FINGER PROTEIN |
| PMEG.utg000166l.33 | SEC31-RELATED PROTEIN |
| PMEG.utg000166l.34 | NEUROLIGIN |
| PMEG.utg000166l.35 | INTERFERON-INDUCED PROTEIN 44 |
| PMEG.utg000166l.36 | INTERFERON-INDUCED PROTEIN 44 |
| PMEG.utg000166l.37 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| PMEG.utg000166l.38 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| PMEG.utg000166l.39 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000166l.4 | PROTEIN HEATR9 |
| PMEG.utg000166l.40 | PROTEIN SIDEKICK |
| PMEG.utg000166l.41 | |
| PMEG.utg000166l.42 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000166l.43 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000166l.44 | |
| PMEG.utg000166l.45 | WW DOMAIN BINDING PROTEIN 2, ISOFORM E |
| PMEG.utg000166l.46 | CASEIN KINASE-RELATED |
| PMEG.utg000166l.47 | ADP-RIBOSYLGLYCOHYDROLASE |
| PMEG.utg000166l.48 | CENTRIOLAR COILED-COIL PROTEIN OF 110 KDA |
| PMEG.utg000166l.49 | FOLLICULIN FAMILY MEMBER |
| PMEG.utg000166l.5 | 40S RIBOSOMAL PROTEIN S15A |
| PMEG.utg000166l.50 | KELCH PROTEIN |
| PMEG.utg000166l.51 | CELL DIVISION PROTEIN KINASE |
| PMEG.utg000166l.52 | T CELL-SPECIFIC ADAPTER PROTEIN TSAD |
| PMEG.utg000166l.53 | UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN |
| PMEG.utg000166l.54 | PORCUPINE |
| PMEG.utg000166l.55 | NEUROLIGIN |
| PMEG.utg000166l.56 | CARBOXYLESTERASE |
| PMEG.utg000166l.57 | NEUROLIGIN |
| PMEG.utg000166l.58 | S-ANTIGEN PROTEIN |
| PMEG.utg000166l.59 | ANNEXIN |
| PMEG.utg000166l.6 | TUDOR DOMAIN CONTAINING PROTEIN |
| PMEG.utg000166l.60 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000166l.61 | HISTONE H2A |
| PMEG.utg000166l.62 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 |
| PMEG.utg000166l.63 | ARYLSULFATASE FAMILY MEMBER |
| PMEG.utg000166l.64 | BINDING PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G14430)-RELATED |
| PMEG.utg000166l.65 | STEREOCILIN RELATED |
| PMEG.utg000166l.66 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| PMEG.utg000166l.67 | |
| PMEG.utg000166l.68 | EPSIN/ENT-RELATED |
