The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000163l.3 | TUBULIN POLYGLUTAMYLASE |
PMEG.utg000163l.30 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
PMEG.utg000163l.31 | CGI-140 |
PMEG.utg000163l.32 | |
PMEG.utg000163l.33 | |
PMEG.utg000163l.34 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
PMEG.utg000163l.35 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
PMEG.utg000163l.36 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
PMEG.utg000163l.37 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
PMEG.utg000163l.38 | SREK1IP1 FAMILY MEMBER |
PMEG.utg000163l.39 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000163l.4 | HISTONE DEACETYLASE HDAC1-RELATED |
PMEG.utg000163l.40 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
PMEG.utg000163l.41 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
PMEG.utg000163l.42 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
PMEG.utg000163l.43 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA |
PMEG.utg000163l.44 | TATA-BOX BINDING PROTEIN |
PMEG.utg000163l.45 | REGULATOR OF CHROMOSOME CONDENSATION |
PMEG.utg000163l.46 | |
PMEG.utg000163l.47 | |
PMEG.utg000163l.48 | |
PMEG.utg000163l.49 | |
PMEG.utg000163l.5 | VOLTAGE-GATED POTASSIUM CHANNEL |
PMEG.utg000163l.50 | WD REPEAT-CONTAINING PROTEIN 36 |
PMEG.utg000163l.51 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
PMEG.utg000163l.52 | SPHINGOSINE KINASE |
PMEG.utg000163l.53 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
PMEG.utg000163l.54 | BETA TRANSDUCIN-RELATED PROTEIN |
PMEG.utg000163l.55 | NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN |
PMEG.utg000163l.56 | DYNEIN INTERMEDIATE CHAIN |
PMEG.utg000163l.57 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
PMEG.utg000163l.58 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
PMEG.utg000163l.59 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000163l.6 | VOLTAGE-GATED POTASSIUM CHANNEL |
PMEG.utg000163l.60 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000163l.61 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000163l.62 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000163l.63 | ACTIVATOR OF S-PHASE KINASE-RELATED |
PMEG.utg000163l.64 | TATD FAMILY DEOXYRIBONUCLEASE |
PMEG.utg000163l.65 | TYROSINE-PROTEIN KINASE |
PMEG.utg000163l.66 | |
PMEG.utg000163l.67 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
PMEG.utg000163l.68 | UNCHARACTERIZED |
PMEG.utg000163l.69 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
PMEG.utg000163l.7 | VOLTAGE-GATED POTASSIUM CHANNEL |
PMEG.utg000163l.70 | |
PMEG.utg000163l.71 | CASEIN KINASE-RELATED |
PMEG.utg000163l.72 | DEDICATOR OF CYTOKINESIS DOCK |
PMEG.utg000163l.73 | |
PMEG.utg000163l.74 | UNCHARACTERIZED |