The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000161l.70 | UNCHARACTERIZED |
| PMEG.utg000161l.71 | MEIOTIC RECOMBINATION PROTEIN REC114 |
| PMEG.utg000161l.72 | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN |
| PMEG.utg000161l.73 | CADHERIN-23 |
| PMEG.utg000161l.74 | CADHERIN-87A |
| PMEG.utg000161l.75 | ADENOSINE DEAMINASE |
| PMEG.utg000161l.76 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| PMEG.utg000161l.77 | TRANSLATION FACTOR |
| PMEG.utg000161l.78 | 30S RIBOSOMAL PROTEIN S14 |
| PMEG.utg000161l.79 | KELCH PROTEIN |
| PMEG.utg000161l.8 | |
| PMEG.utg000161l.80 | LIPIN |
| PMEG.utg000161l.81 | ANKYRIN REPEAT PROTEIN |
| PMEG.utg000161l.82 | |
| PMEG.utg000161l.83 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| PMEG.utg000161l.84 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000161l.85 | CARBOXYMETHYLENEBUTENOLIDASE-RELATED |
| PMEG.utg000161l.86 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 |
| PMEG.utg000161l.9 | |
| PMEG.utg000162l.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000162l.10 | MATRIX PROTEIN, PUTATIVE-RELATED |
| PMEG.utg000162l.11 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
| PMEG.utg000162l.12 | UNCHARACTERIZED |
| PMEG.utg000162l.13 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| PMEG.utg000162l.14 | R3H DOMAIN-CONTAINING PROTEIN 4 |
| PMEG.utg000162l.15 | |
| PMEG.utg000162l.16 | EH DOMAIN |
| PMEG.utg000162l.17 | ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000162l.18 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| PMEG.utg000162l.19 | ETHANOLAMINEPHOSPHOTRANSFERASE |
| PMEG.utg000162l.2 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000162l.20 | PLACENTAL PROTEIN 11-RELATED |
| PMEG.utg000162l.21 | AD039 HT014 THIOREDOXIN FAMILY TRP26 |
| PMEG.utg000162l.22 | PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED |
| PMEG.utg000162l.23 | S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE |
| PMEG.utg000162l.24 | G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000162l.25 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| PMEG.utg000162l.26 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000162l.27 | TUBULIN |
| PMEG.utg000162l.28 | ZINC FINGER, ZZ TYPE |
| PMEG.utg000162l.29 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| PMEG.utg000162l.3 | LD30288P |
| PMEG.utg000162l.30 | |
| PMEG.utg000162l.31 | PERIOSTIN-RELATED |
| PMEG.utg000162l.32 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| PMEG.utg000162l.33 | GLUCOKINASE REGULATORY PROTEIN |
| PMEG.utg000162l.34 | VITELLOGENIN-RELATED |
| PMEG.utg000162l.35 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| PMEG.utg000162l.36 | PID DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000162l.37 | CALRETICULIN AND CALNEXIN |
