The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000150l.10 | UNCHARACTERIZED |
| PMEG.utg000150l.11 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000150l.13 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
| PMEG.utg000150l.14 | NICOTINATE PHOSPHORIBOSYLTRANSFERASE |
| PMEG.utg000150l.15 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| PMEG.utg000150l.16 | GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN |
| PMEG.utg000150l.17 | ORGANIC ANION TRANSPORTER |
| PMEG.utg000150l.18 | ORGANIC ANION TRANSPORTER |
| PMEG.utg000150l.2 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 12 |
| PMEG.utg000150l.4 | ARRESTIN DOMAIN-CONTAINING PROTEIN D |
| PMEG.utg000150l.5 | |
| PMEG.utg000150l.6 | METHIONYL-TRNA SYNTHETASE |
| PMEG.utg000150l.7 | CYTOKINESIS PROTEIN 3 |
| PMEG.utg000150l.9 | LD41958P |
| PMEG.utg000151l.1 | |
| PMEG.utg000151l.10 | F-BOX ONLY PROTEIN 48-RELATED |
| PMEG.utg000151l.11 | |
| PMEG.utg000151l.12 | KELCH DOMAIN-CONTAINING PROTEIN 9 |
| PMEG.utg000151l.13 | MYOTUBULARIN-RELATED |
| PMEG.utg000151l.14 | |
| PMEG.utg000151l.15 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| PMEG.utg000151l.16 | CHAPERONIN |
| PMEG.utg000151l.17 | ENOYL-COA HYDRATASE |
| PMEG.utg000151l.18 | |
| PMEG.utg000151l.19 | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED |
| PMEG.utg000151l.2 | UNCHARACTERIZED |
| PMEG.utg000151l.20 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| PMEG.utg000151l.21 | CALCIUM BINDING PROTEIN |
| PMEG.utg000151l.22 | DELTEX-RELATED |
| PMEG.utg000151l.23 | KELCH PROTEIN |
| PMEG.utg000151l.24 | COILED-COIL DOMAIN-CONTAINING PROTEIN 60 |
| PMEG.utg000151l.25 | |
| PMEG.utg000151l.26 | CADHERIN-23 |
| PMEG.utg000151l.27 | CADHERIN-23 |
| PMEG.utg000151l.28 | DESMOGLEIN FAMILY MEMBER |
| PMEG.utg000151l.29 | |
| PMEG.utg000151l.3 | CADHERIN-87A |
| PMEG.utg000151l.30 | IMMUNOGLOBULIN |
| PMEG.utg000151l.31 | MYOSIN LIGHT CHAIN 1, 3 |
| PMEG.utg000151l.32 | MYOSIN LIGHT CHAIN 1, 3 |
| PMEG.utg000151l.33 | POTASSIUM CHANNEL, SUBFAMILY K |
| PMEG.utg000151l.34 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| PMEG.utg000151l.35 | ZGC:136858 |
| PMEG.utg000151l.36 | PROTEIN KINASE C-BINDING PROTEIN 1 |
| PMEG.utg000151l.37 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| PMEG.utg000151l.38 | VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED |
| PMEG.utg000151l.39 | PHOSPHATIDYLINOSITOL KINASE |
| PMEG.utg000151l.4 | |
| PMEG.utg000151l.40 | EG:80H7.2 PROTEIN |
| PMEG.utg000151l.41 | HCLS1-BINDING PROTEIN 3 |
