The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000147l.1 | |
PMEG.utg000147l.10 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
PMEG.utg000147l.11 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
PMEG.utg000147l.12 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000147l.13 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
PMEG.utg000147l.14 | |
PMEG.utg000147l.15 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8 |
PMEG.utg000147l.16 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN |
PMEG.utg000147l.17 | NF-KAPPA B ACTIVATING PROTEIN |
PMEG.utg000147l.18 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
PMEG.utg000147l.2 | |
PMEG.utg000147l.20 | MYOSIN LIGHT CHAIN 1, 3 |
PMEG.utg000147l.21 | GLR0591 PROTEIN |
PMEG.utg000147l.22 | MYOSIN VII, XV |
PMEG.utg000147l.23 | |
PMEG.utg000147l.24 | RAS-RELATED PROTEIN RAB |
PMEG.utg000147l.25 | |
PMEG.utg000147l.26 | |
PMEG.utg000147l.28 | |
PMEG.utg000147l.3 | JITTERBUG, ISOFORM N |
PMEG.utg000147l.4 | CARBONIC ANHYDRASE |
PMEG.utg000147l.5 | PHOSPHOLIPID SCRAMBLASE-RELATED |
PMEG.utg000147l.6 | SERINE/THREONINE-PROTEIN KINASE TAO |
PMEG.utg000147l.7 | CYSTEINE PROTEASE ATG4 |
PMEG.utg000147l.8 | PEPTIDASE |
PMEG.utg000148l.1 | DEATH DOMAIN-CONTAINING PROTEIN |
PMEG.utg000148l.10 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
PMEG.utg000148l.100 | NEUROLIGIN |
PMEG.utg000148l.101 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
PMEG.utg000148l.102 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
PMEG.utg000148l.103 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
PMEG.utg000148l.104 | NUCLEAR RECEPTOR COACTIVATOR 6 |
PMEG.utg000148l.105 | ANNEXIN |
PMEG.utg000148l.106 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72 |
PMEG.utg000148l.107 | |
PMEG.utg000148l.108 | DNAJ HOMOLOG SUBFAMILY C MEMBER 14 |
PMEG.utg000148l.109 | UNCHARACTERIZED |
PMEG.utg000148l.11 | ENOYL-COA HYDRATASE-RELATED |
PMEG.utg000148l.110 | UV EXCISION REPAIR PROTEIN RAD23 |
PMEG.utg000148l.111 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
PMEG.utg000148l.112 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000148l.113 | 3'-5' EXONUCLEASE ERI1-RELATED |
PMEG.utg000148l.114 | KICSTOR COMPLEX PROTEIN SZT2 |
PMEG.utg000148l.115 | UNCHARACTERIZED |
PMEG.utg000148l.116 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT |
PMEG.utg000148l.117 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000148l.118 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
PMEG.utg000148l.119 | DNA PRIMASE LARGE SUBUNIT |
PMEG.utg000148l.12 | ELONGIN-C |
PMEG.utg000148l.120 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |