About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000147l.1
PMEG.utg000147l.10METHYLTRANSFERASE-LIKE PROTEIN 24
PMEG.utg000147l.11GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
PMEG.utg000147l.12IONOTROPIC GLUTAMATE RECEPTOR
PMEG.utg000147l.13NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED
PMEG.utg000147l.14
PMEG.utg000147l.15VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
PMEG.utg000147l.16EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN
PMEG.utg000147l.17NF-KAPPA B ACTIVATING PROTEIN
PMEG.utg000147l.18TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
PMEG.utg000147l.2
PMEG.utg000147l.20MYOSIN LIGHT CHAIN 1, 3
PMEG.utg000147l.21GLR0591 PROTEIN
PMEG.utg000147l.22MYOSIN VII, XV
PMEG.utg000147l.23
PMEG.utg000147l.24RAS-RELATED PROTEIN RAB
PMEG.utg000147l.25
PMEG.utg000147l.26
PMEG.utg000147l.28
PMEG.utg000147l.3JITTERBUG, ISOFORM N
PMEG.utg000147l.4CARBONIC ANHYDRASE
PMEG.utg000147l.5PHOSPHOLIPID SCRAMBLASE-RELATED
PMEG.utg000147l.6SERINE/THREONINE-PROTEIN KINASE TAO
PMEG.utg000147l.7CYSTEINE PROTEASE ATG4
PMEG.utg000147l.8PEPTIDASE
PMEG.utg000148l.1DEATH DOMAIN-CONTAINING PROTEIN
PMEG.utg000148l.10E3 UBIQUITIN-PROTEIN LIGASE HECTD3
PMEG.utg000148l.100NEUROLIGIN
PMEG.utg000148l.101G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
PMEG.utg000148l.102CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
PMEG.utg000148l.103BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
PMEG.utg000148l.104NUCLEAR RECEPTOR COACTIVATOR 6
PMEG.utg000148l.105ANNEXIN
PMEG.utg000148l.106LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72
PMEG.utg000148l.107
PMEG.utg000148l.108DNAJ HOMOLOG SUBFAMILY C MEMBER 14
PMEG.utg000148l.109UNCHARACTERIZED
PMEG.utg000148l.11ENOYL-COA HYDRATASE-RELATED
PMEG.utg000148l.110UV EXCISION REPAIR PROTEIN RAD23
PMEG.utg000148l.111PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
PMEG.utg000148l.112ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
PMEG.utg000148l.1133'-5' EXONUCLEASE ERI1-RELATED
PMEG.utg000148l.114KICSTOR COMPLEX PROTEIN SZT2
PMEG.utg000148l.115UNCHARACTERIZED
PMEG.utg000148l.116NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT
PMEG.utg000148l.117CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
PMEG.utg000148l.118LYSOSOMAL COBALAMIN TRANSPORTER-RELATED
PMEG.utg000148l.119DNA PRIMASE LARGE SUBUNIT
PMEG.utg000148l.12ELONGIN-C
PMEG.utg000148l.120ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
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