The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000143l.13 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
| PMEG.utg000143l.14 | ZYXIN/TRIP6 |
| PMEG.utg000143l.15 | UREASE ACCESSORY PROTEIN F |
| PMEG.utg000143l.16 | PERIOD CIRCADIAN PROTEIN |
| PMEG.utg000143l.17 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
| PMEG.utg000143l.19 | NOT56 - RELATED |
| PMEG.utg000143l.2 | OS10G0105400 PROTEIN |
| PMEG.utg000143l.20 | ZINC FINGER PROTEIN |
| PMEG.utg000143l.21 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| PMEG.utg000143l.3 | PHOSPHOLIPASE A2 FAMILY MEMBER |
| PMEG.utg000143l.4 | RIBOSOMAL RNA METHYLTRANSFERASE |
| PMEG.utg000143l.5 | HYALURONIDASE |
| PMEG.utg000143l.6 | |
| PMEG.utg000143l.7 | HYALURONIDASE |
| PMEG.utg000143l.9 | |
| PMEG.utg000144l.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| PMEG.utg000144l.2 | SIDESTEP PROTEIN |
| PMEG.utg000144l.3 | SIDESTEP PROTEIN |
| PMEG.utg000144l.4 | TITIN |
| PMEG.utg000144l.5 | SIDESTEP PROTEIN |
| PMEG.utg000145l.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| PMEG.utg000145l.10 | CT120 PROTEIN |
| PMEG.utg000145l.11 | T-BOX PROTEIN-RELATED |
| PMEG.utg000145l.12 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| PMEG.utg000145l.14 | A-KINASE ANCHOR PROTEINS |
| PMEG.utg000145l.15 | PHOSPHOGLYCERATE MUTASE-RELATED |
| PMEG.utg000145l.16 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| PMEG.utg000145l.17 | GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 |
| PMEG.utg000145l.18 | G PATCH DOMAIN CONTAINING PROTEIN 3 |
| PMEG.utg000145l.19 | STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 |
| PMEG.utg000145l.2 | HYDROLASE |
| PMEG.utg000145l.20 | BETA TRANSDUCIN-RELATED PROTEIN |
| PMEG.utg000145l.21 | PROPERDIN |
| PMEG.utg000145l.22 | |
| PMEG.utg000145l.23 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| PMEG.utg000145l.24 | TRIACYLGLYCEROL LIPASE |
| PMEG.utg000145l.25 | HILLARIN |
| PMEG.utg000145l.26 | HILLARIN |
| PMEG.utg000145l.27 | PHOSPHATIDYLGLYCEROL PHOSPHOLIPASE C |
| PMEG.utg000145l.28 | PRE-MRNA-PROCESSING FACTOR 19 |
| PMEG.utg000145l.29 | DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 1 |
| PMEG.utg000145l.3 | UNCHARACTERIZED |
| PMEG.utg000145l.30 | |
| PMEG.utg000145l.31 | DNA-REPAIR PROTEIN XRCC1 |
| PMEG.utg000145l.32 | P53-INDUCED PROTEIN RELATED |
| PMEG.utg000145l.33 | RNA-BINDING MOTIF PROTEIN 14B |
| PMEG.utg000145l.34 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| PMEG.utg000145l.35 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| PMEG.utg000145l.36 | UNCHARACTERIZED PROTEIN C1ORF50 |
| PMEG.utg000145l.37 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
