The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000001l.1 | METALLOPROTEASE |
| PMEG.utg000001l.10 | TRANSAMIDASE |
| PMEG.utg000001l.100 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P |
| PMEG.utg000001l.101 | UNCHARACTERIZED |
| PMEG.utg000001l.102 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| PMEG.utg000001l.103 | PRE-MRNA-SPLICING FACTOR ISY1 |
| PMEG.utg000001l.104 | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED |
| PMEG.utg000001l.11 | |
| PMEG.utg000001l.12 | |
| PMEG.utg000001l.13 | ALKYL/ARYL-SULFATASE |
| PMEG.utg000001l.14 | ZINC FINGER PROTEIN |
| PMEG.utg000001l.15 | PHOSPHOLIPASE-RELATED |
| PMEG.utg000001l.16 | PROTEIN SSUH2 HOMOLOG |
| PMEG.utg000001l.17 | ATP SYNTHASE GAMMA CHAIN |
| PMEG.utg000001l.18 | SORTILIN RELATED |
| PMEG.utg000001l.19 | U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2 |
| PMEG.utg000001l.2 | FAT ATYPICAL CADHERIN-RELATED |
| PMEG.utg000001l.20 | CARBOXYLESTERASE |
| PMEG.utg000001l.21 | PHD/F-BOX CONTAINING PROTEIN |
| PMEG.utg000001l.22 | N-ACYLGLUCOSAMINE-2-EPIMERASE |
| PMEG.utg000001l.23 | LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN |
| PMEG.utg000001l.24 | AP ENDONUCLEASE |
| PMEG.utg000001l.25 | |
| PMEG.utg000001l.26 | |
| PMEG.utg000001l.27 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000001l.28 | E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED |
| PMEG.utg000001l.29 | MANNOSIDASE, BETA A, LYSOSOMAL-LIKE, MANBAL PROTEIN |
| PMEG.utg000001l.3 | RHO FAMILY GTPASE |
| PMEG.utg000001l.30 | |
| PMEG.utg000001l.31 | VILLIN |
| PMEG.utg000001l.32 | UNCHARACTERIZED |
| PMEG.utg000001l.33 | VILLIN |
| PMEG.utg000001l.34 | VILLIN |
| PMEG.utg000001l.35 | VILLIN |
| PMEG.utg000001l.36 | TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT |
| PMEG.utg000001l.37 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1 |
| PMEG.utg000001l.38 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1 |
| PMEG.utg000001l.39 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1 |
| PMEG.utg000001l.4 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| PMEG.utg000001l.40 | S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN |
| PMEG.utg000001l.41 | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED |
| PMEG.utg000001l.42 | UBIQUITIN-LIKE PROTEIN 4A |
| PMEG.utg000001l.43 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
| PMEG.utg000001l.44 | NUCLEAR-INTERACTING PARTNER OF ALK |
| PMEG.utg000001l.45 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000001l.46 | VACUOLAR MEMBRANE PROTEIN YPL162C |
| PMEG.utg000001l.47 | POLYCOMB GROUP PROTEIN |
| PMEG.utg000001l.48 | DNAJ HOMOLOG SUBFAMILY C MEMBER 2 |
| PMEG.utg000001l.49 | ADP-RIBOSYLGLYCOHYDROLASE |
| PMEG.utg000001l.5 | TRANSAMIDASE |
