The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000003l.18 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
| PMEG.utg000003l.19 | ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED |
| PMEG.utg000003l.2 | OXYGENASE-RELATED |
| PMEG.utg000003l.20 | |
| PMEG.utg000003l.21 | |
| PMEG.utg000003l.22 | ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE |
| PMEG.utg000003l.23 | METHYLTRANSFERASE, FKBM FAMILY PROTEIN |
| PMEG.utg000003l.24 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| PMEG.utg000003l.25 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| PMEG.utg000003l.26 | T-BOX PROTEIN-RELATED |
| PMEG.utg000003l.27 | BREAST CARCINOMA AMPLIFIED SEQUENCE 3 |
| PMEG.utg000003l.28 | SWAP-70 RECOMBINASE |
| PMEG.utg000003l.29 | BETA TRANSDUCIN-RELATED PROTEIN |
| PMEG.utg000003l.3 | OPTICIN |
| PMEG.utg000003l.30 | |
| PMEG.utg000003l.31 | |
| PMEG.utg000003l.32 | L-ASPARTATE DEHYDROGENASE-RELATED |
| PMEG.utg000003l.33 | GAMETOGENETIN-BINDING PROTEIN 2 |
| PMEG.utg000003l.34 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| PMEG.utg000003l.35 | FOIE GRAS |
| PMEG.utg000003l.36 | UNCHARACTERIZED |
| PMEG.utg000003l.37 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| PMEG.utg000003l.38 | APOPTOSIS-INDUCING FACTOR 1 |
| PMEG.utg000003l.39 | FMS INTERACTING PROTEIN |
| PMEG.utg000003l.4 | SODIUM/NUCLEOSIDE COTRANSPORTER |
| PMEG.utg000003l.40 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| PMEG.utg000003l.41 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000003l.42 | |
| PMEG.utg000003l.43 | CADHERIN-87A |
| PMEG.utg000003l.44 | MYB-BINDING PROTEIN 1A FAMILY MEMBER |
| PMEG.utg000003l.45 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
| PMEG.utg000003l.46 | UNCHARACTERIZED |
| PMEG.utg000003l.47 | D-DOPACHROME DECARBOXYLASE |
| PMEG.utg000003l.48 | |
| PMEG.utg000003l.49 | |
| PMEG.utg000003l.5 | MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS |
| PMEG.utg000003l.50 | |
| PMEG.utg000003l.51 | FIBROSIN FAMILY MEMBER |
| PMEG.utg000003l.52 | |
| PMEG.utg000003l.53 | |
| PMEG.utg000003l.6 | ATP-BINDING CASSETTE SUB-FAMILY C |
| PMEG.utg000003l.7 | MITOGEN-ACTIVATED PROTEIN KINASE |
| PMEG.utg000003l.8 | |
| PMEG.utg000003l.9 | WD40 REPEAT PROTEIN |
| PMEG.utg000004l.1 | ZINC TRANSPORTER 6 |
| PMEG.utg000004l.10 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| PMEG.utg000004l.11 | CNH DOMAIN CONTAINING |
| PMEG.utg000004l.12 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| PMEG.utg000004l.13 | APOPTOSIS-STIMULATING OF P53 PROTEIN |
| PMEG.utg000004l.14 | DNA POLYMERASE ETA |
