The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000148l.121 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
PMEG.utg000148l.122 | UNCHARACTERIZED |
PMEG.utg000148l.123 | NUCLEOTIDE KINASE |
PMEG.utg000148l.124 | HILLARIN |
PMEG.utg000148l.125 | HILLARIN |
PMEG.utg000148l.126 | RIBONUCLEASE |
PMEG.utg000148l.13 | GLYOXALASE FAMILY PROTEIN |
PMEG.utg000148l.14 | SUA5 |
PMEG.utg000148l.15 | SUA5 |
PMEG.utg000148l.16 | 2-METHYLCITRATE DEHYDRATASE-RELATED |
PMEG.utg000148l.17 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
PMEG.utg000148l.18 | PROTEIN STPG4 |
PMEG.utg000148l.19 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
PMEG.utg000148l.2 | CABIT DOMAIN-CONTAINING PROTEIN |
PMEG.utg000148l.20 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
PMEG.utg000148l.21 | DEK PROTEIN |
PMEG.utg000148l.22 | TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED |
PMEG.utg000148l.23 | LIPASE |
PMEG.utg000148l.24 | LIPID PHOSPHATE PHOSPHATASE |
PMEG.utg000148l.25 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
PMEG.utg000148l.26 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
PMEG.utg000148l.27 | HISTONE DEACETYLASE HDAC1-RELATED |
PMEG.utg000148l.28 | SPERMATOGENESIS-ASSOCIATED PROTEIN 1 |
PMEG.utg000148l.29 | MUF1 |
PMEG.utg000148l.3 | LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED |
PMEG.utg000148l.30 | FI20236P1 |
PMEG.utg000148l.31 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
PMEG.utg000148l.32 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
PMEG.utg000148l.33 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
PMEG.utg000148l.34 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
PMEG.utg000148l.35 | MRNA EXPORT FACTOR AND BUB3 |
PMEG.utg000148l.36 | REGUCALCIN |
PMEG.utg000148l.37 | REGUCALCIN |
PMEG.utg000148l.38 | REGUCALCIN |
PMEG.utg000148l.39 | XK-RELATED PROTEIN |
PMEG.utg000148l.4 | CRSP70 |
PMEG.utg000148l.40 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
PMEG.utg000148l.41 | IMPORTIN-7, 8, 11 |
PMEG.utg000148l.42 | XK-RELATED PROTEIN |
PMEG.utg000148l.43 | - |
PMEG.utg000148l.45 | RAS-RELATED PROTEIN RAB |
PMEG.utg000148l.46 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000148l.47 | LEUCOKININ RECEPTOR-RELATED |
PMEG.utg000148l.48 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000148l.49 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
PMEG.utg000148l.5 | TAL1 SCL INTERRUPTING LOCUS |
PMEG.utg000148l.51 | SPERMATHECAL PHYSIOLOGY VARIANT |
PMEG.utg000148l.52 | LD33804P |
PMEG.utg000148l.53 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
PMEG.utg000148l.54 | COILED-COIL DOMAIN-CONTAINING PROTEIN 24 |