The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000151l.42 | SERINE INCORPORATOR |
PMEG.utg000151l.43 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
PMEG.utg000151l.44 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
PMEG.utg000151l.45 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
PMEG.utg000151l.46 | |
PMEG.utg000151l.47 | 60S ACIDIC RIBOSOMAL PROTEIN P0 |
PMEG.utg000151l.48 | T-BOX PROTEIN-RELATED |
PMEG.utg000151l.49 | DNAJ HOMOLOG SUBFAMILY B MEMBER 9 |
PMEG.utg000151l.5 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
PMEG.utg000151l.50 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
PMEG.utg000151l.6 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
PMEG.utg000151l.7 | UNCHARACTERIZED |
PMEG.utg000151l.8 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
PMEG.utg000151l.9 | PROLYL ENDOPEPTIDASE |
PMEG.utg000152l.2 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000152l.3 | OPSIN |
PMEG.utg000153l.1 | |
PMEG.utg000153l.10 | YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN |
PMEG.utg000153l.11 | ALPHA-AMYLASE FAMILY MEMBER |
PMEG.utg000153l.12 | TPR REPEAT CONTAINING PROTEIN |
PMEG.utg000153l.13 | FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED |
PMEG.utg000153l.14 | DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN |
PMEG.utg000153l.2 | |
PMEG.utg000153l.3 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
PMEG.utg000153l.4 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
PMEG.utg000153l.5 | CATION TRANSPORT PROTEIN CHAC-RELATED |
PMEG.utg000153l.6 | HELICASE SRCAP-RELATED |
PMEG.utg000153l.7 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000153l.8 | CHITINASE |
PMEG.utg000153l.9 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
PMEG.utg000155l.1 | DUAL SPECIFICITY PROTEIN KINASE |
PMEG.utg000155l.10 | TUMOR PROTEIN D52 |
PMEG.utg000155l.11 | RIBOPHORIN II |
PMEG.utg000155l.12 | CALCIUM BINDING PROTEIN |
PMEG.utg000155l.13 | |
PMEG.utg000155l.14 | DELTEX-RELATED |
PMEG.utg000155l.15 | ORGANIC ANION TRANSPORTER |
PMEG.utg000155l.16 | 60S RIBOSOMAL PROTEIN L7 |
PMEG.utg000155l.17 | FAS-ASSOCIATED PROTEIN |
PMEG.utg000155l.18 | FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED |
PMEG.utg000155l.19 | PLACENTAL PROTEIN 11-RELATED |
PMEG.utg000155l.2 | PROTEIN STAR |
PMEG.utg000155l.20 | PAPILLOMAVIRUS REGULATORY FACTOR PRF-1 |
PMEG.utg000155l.22 | ANKYRIN REPEAT FAMILY A |
PMEG.utg000155l.23 | SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT |
PMEG.utg000155l.24 | ORGANIC ANION TRANSPORTER |
PMEG.utg000155l.25 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
PMEG.utg000155l.3 | |
PMEG.utg000155l.4 | SYNDECAN |
PMEG.utg000155l.5 | UNCHARACTERIZED |