The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000155l.6 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| PMEG.utg000155l.7 | UNCHARACTERIZED |
| PMEG.utg000155l.8 | |
| PMEG.utg000155l.9 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| PMEG.utg000156l.1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| PMEG.utg000156l.2 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| PMEG.utg000156l.3 | |
| PMEG.utg000156l.4 | MITOFILIN |
| PMEG.utg000156l.5 | |
| PMEG.utg000156l.6 | 39S RIBOSOMAL PROTEIN L35, MITOCHONDRIAL |
| PMEG.utg000157l.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000157l.10 | |
| PMEG.utg000157l.11 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
| PMEG.utg000157l.12 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| PMEG.utg000157l.13 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000157l.14 | |
| PMEG.utg000157l.15 | |
| PMEG.utg000157l.16 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| PMEG.utg000157l.17 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| PMEG.utg000157l.18 | |
| PMEG.utg000157l.19 | CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1 |
| PMEG.utg000157l.2 | ALPHA-AMYLASE |
| PMEG.utg000157l.20 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| PMEG.utg000157l.21 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| PMEG.utg000157l.22 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| PMEG.utg000157l.23 | RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN |
| PMEG.utg000157l.24 | ZINC FINGER PROTEIN |
| PMEG.utg000157l.25 | 14-3-3 PROTEIN |
| PMEG.utg000157l.26 | MRNA TURNOVER PROTEIN 4 MRTO4 |
| PMEG.utg000157l.27 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| PMEG.utg000157l.28 | VOLTAGE-GATED POTASSIUM CHANNEL |
| PMEG.utg000157l.29 | FLAVIN MONOAMINE OXIDASE |
| PMEG.utg000157l.3 | NEUROLIGIN |
| PMEG.utg000157l.30 | CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS |
| PMEG.utg000157l.31 | DNA-BINDING PROTEIN SATB FAMILY MEMBER |
| PMEG.utg000157l.32 | DNA-BINDING PROTEIN SATB FAMILY MEMBER |
| PMEG.utg000157l.33 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| PMEG.utg000157l.34 | VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE |
| PMEG.utg000157l.35 | UNCHARACTERIZED |
| PMEG.utg000157l.36 | UNCHARACTERIZED |
| PMEG.utg000157l.37 | PROTEIN CBG12474 |
| PMEG.utg000157l.38 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 |
| PMEG.utg000157l.39 | ASAP FAMILY MEMBER |
| PMEG.utg000157l.4 | FI19480P1 |
| PMEG.utg000157l.5 | PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED |
| PMEG.utg000157l.6 | ANDROGEN-INDUCED PROTEIN 1-RELATED |
| PMEG.utg000157l.7 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
| PMEG.utg000157l.8 | |
| PMEG.utg000157l.9 | |
| PMEG.utg000158l.1 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
