The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000141l.83 | SAL-LIKE PROTEIN |
PMEG.utg000141l.84 | ATP-DEPENDENT PROTEASE |
PMEG.utg000141l.85 | |
PMEG.utg000141l.86 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
PMEG.utg000141l.87 | CYCLIN D1-BINDING PROTEIN 1 |
PMEG.utg000141l.88 | PROGRAMMED CELL DEATH PROTEIN 5 |
PMEG.utg000141l.89 | - |
PMEG.utg000141l.9 | NIPSNAP-RELATED |
PMEG.utg000141l.90 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1 |
PMEG.utg000141l.91 | ADHESION G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000141l.92 | SODIUM-BILE ACID COTRANSPORTER |
PMEG.utg000141l.93 | SODIUM-BILE ACID COTRANSPORTER |
PMEG.utg000141l.94 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000141l.95 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000141l.96 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000141l.97 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED |
PMEG.utg000141l.98 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED |
PMEG.utg000141l.99 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
PMEG.utg000142l.1 | ELECTRON TRANSPORT OXIDOREDUCTASE |
PMEG.utg000142l.10 | TYROSINE-PROTEIN KINASE HOPSCOTCH |
PMEG.utg000142l.11 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
PMEG.utg000142l.12 | HYDROXYMETHYLGLUTARYL-COA LYASE |
PMEG.utg000142l.13 | 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED |
PMEG.utg000142l.14 | AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28 |
PMEG.utg000142l.15 | TETRATRICOPEPTIDE REPEAT PROTEIN |
PMEG.utg000142l.16 | RNA METHYLASE-RELATED |
PMEG.utg000142l.17 | PROTEASOME INHIBITOR |
PMEG.utg000142l.18 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 |
PMEG.utg000142l.19 | PROTON CHANNEL OTOP |
PMEG.utg000142l.2 | UPSTREAM BINDING TRANSCRIPTION FACTOR |
PMEG.utg000142l.20 | DISCS LARGE |
PMEG.utg000142l.21 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000142l.22 | PHOSPHATIDYLINOSITOL SYNTHASE |
PMEG.utg000142l.23 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER |
PMEG.utg000142l.24 | LIPASE |
PMEG.utg000142l.25 | ORGANIC ANION TRANSPORTER |
PMEG.utg000142l.26 | NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1 |
PMEG.utg000142l.27 | VACUOLAR PROTEIN 8 |
PMEG.utg000142l.28 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
PMEG.utg000142l.3 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
PMEG.utg000142l.4 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000142l.5 | SERINE/THREONINE-PROTEIN KINASE RIO1 |
PMEG.utg000142l.6 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
PMEG.utg000142l.7 | BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED |
PMEG.utg000142l.8 | |
PMEG.utg000142l.9 | ORGANIC ANION TRANSPORTER |
PMEG.utg000143l.1 | PEROXISOMAL MEMBRANE PROTEIN PEX14 |
PMEG.utg000143l.10 | |
PMEG.utg000143l.11 | SRC-ASSOCIATED ADAPTOR PROTEIN |
PMEG.utg000143l.12 | PROTEIN DISPATCHED HOMOLOG 3 |