The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000166l.111 | NEURON-DERIVED NEUROTROPHIC FACTOR |
PMEG.utg000166l.112 | SI:DKEY-19B23.12-RELATED |
PMEG.utg000166l.113 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
PMEG.utg000166l.114 | TEKTIN |
PMEG.utg000166l.115 | FATTY ACID SYNTHASE |
PMEG.utg000166l.116 | RNA-BINDING PROTEIN LUC7-RELATED |
PMEG.utg000166l.117 | |
PMEG.utg000166l.118 | ANNEXIN |
PMEG.utg000166l.119 | B9 DOMAIN-CONTAINING |
PMEG.utg000166l.12 | |
PMEG.utg000166l.120 | 5-HYDROXYTRYPTAMINE RECEPTOR |
PMEG.utg000166l.121 | CASPASE |
PMEG.utg000166l.122 | 60S RIBOSOMAL PROTEIN L18 |
PMEG.utg000166l.123 | SPHINGOSINE KINASE |
PMEG.utg000166l.124 | FAS-BINDING FACTOR 1 |
PMEG.utg000166l.125 | NUCLEOSIDE DIPHOSPHATE KINASE |
PMEG.utg000166l.126 | VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED |
PMEG.utg000166l.127 | 60S RIBOSOMAL PROTEIN L34 |
PMEG.utg000166l.128 | DILUTE DOMAIN-CONTAINING PROTEIN YPR089W |
PMEG.utg000166l.129 | PROLYL HYDROXYLASE-RELATED |
PMEG.utg000166l.13 | TRANSCRIPTION INITIATION FACTOR IA RRN3 |
PMEG.utg000166l.130 | UNCHARACTERIZED |
PMEG.utg000166l.131 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 11 |
PMEG.utg000166l.132 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000166l.133 | TNF RECEPTOR ASSOCIATED FACTOR |
PMEG.utg000166l.134 | VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL |
PMEG.utg000166l.135 | SPHINGOMYELIN SYNTHETASE |
PMEG.utg000166l.136 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000166l.137 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
PMEG.utg000166l.138 | CERAMIDASE |
PMEG.utg000166l.139 | SYNAPTOGYRIN |
PMEG.utg000166l.14 | COILIN P80 |
PMEG.utg000166l.140 | ZINC FINGER PROTEIN 598 |
PMEG.utg000166l.141 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
PMEG.utg000166l.142 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
PMEG.utg000166l.143 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
PMEG.utg000166l.144 | DEOXYNUCLEOSIDE KINASE |
PMEG.utg000166l.145 | PROTEIN FAM227B |
PMEG.utg000166l.146 | RIBONUCLEASE P SUBUNIT P21 |
PMEG.utg000166l.147 | PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL |
PMEG.utg000166l.148 | PDZ AND LIM DOMAIN PROTEIN ZASP |
PMEG.utg000166l.149 | TMEM26 PROTEIN |
PMEG.utg000166l.15 | UNCHARACTERIZED |
PMEG.utg000166l.150 | CHITINASE |
PMEG.utg000166l.151 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000166l.152 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000166l.153 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000166l.154 | COLON CANCER-ASSOCIATED PROTEIN MIC1 |
PMEG.utg000166l.155 | PROTEIN G1-LIKE2 |
PMEG.utg000166l.156 | METALLO PHOSPHOESTERASE RELATED |