The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000167l.159 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
PMEG.utg000167l.16 | DYNEIN HEAVY CHAIN |
PMEG.utg000167l.160 | PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE |
PMEG.utg000167l.161 | |
PMEG.utg000167l.162 | |
PMEG.utg000167l.163 | |
PMEG.utg000167l.164 | BLUE CHEESE |
PMEG.utg000167l.165 | 2-OXOGLUTARATE DEHYDROGENASE |
PMEG.utg000167l.166 | SPECKLE-TYPE POZ PROTEIN |
PMEG.utg000167l.167 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
PMEG.utg000167l.168 | ARFAPTIN-RELATED |
PMEG.utg000167l.169 | FATTY ACID SYNTHASE |
PMEG.utg000167l.17 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
PMEG.utg000167l.170 | |
PMEG.utg000167l.171 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
PMEG.utg000167l.172 | ENOYL-COA HYDRATASE-RELATED |
PMEG.utg000167l.173 | PROTEIN DISULFIDE ISOMERASE |
PMEG.utg000167l.174 | UNCHARACTERIZED |
PMEG.utg000167l.175 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
PMEG.utg000167l.177 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |
PMEG.utg000167l.178 | TESTIS-EXPRESSED PROTEIN 47 |
PMEG.utg000167l.179 | ENOYL-COA HYDRATASE-RELATED |
PMEG.utg000167l.18 | CLUSTERIN ASSOCIATED PROTEIN 1 |
PMEG.utg000167l.180 | 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE |
PMEG.utg000167l.181 | SNF2/RAD54 FAMILY MEMBER |
PMEG.utg000167l.182 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 9 |
PMEG.utg000167l.183 | ESOPHAGEAL CANCER ASSOCIATED PROTEIN |
PMEG.utg000167l.184 | TESTIS-EXPRESSED PROTEIN 15 |
PMEG.utg000167l.185 | |
PMEG.utg000167l.186 | NUCLEAR PROTEIN LOCALIZATION 4 |
PMEG.utg000167l.187 | |
PMEG.utg000167l.188 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
PMEG.utg000167l.189 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
PMEG.utg000167l.19 | SERINE HYDROXYMETHYLTRANSFERASE |
PMEG.utg000167l.190 | BETA-LACTAMASE-RELATED |
PMEG.utg000167l.191 | SNF2/RAD54 FAMILY MEMBER |
PMEG.utg000167l.192 | TETHER CONTAINING UBX DOMAIN FOR GLUT4 |
PMEG.utg000167l.193 | SPERIOLIN-BINDING FACTOR |
PMEG.utg000167l.194 | CASPASE |
PMEG.utg000167l.195 | |
PMEG.utg000167l.196 | TANDEM PH DOMAIN CONTAINING PROTEIN |
PMEG.utg000167l.197 | ANKYRIN REPEAT-CONTAINING |
PMEG.utg000167l.198 | MODULATOR OF SMOOTHENED PROTEIN |
PMEG.utg000167l.2 | CENTROSOMAL PROTEIN OF 131 KDA |
PMEG.utg000167l.20 | 39S RIBOSOMAL PROTEIN L12 |
PMEG.utg000167l.200 | UNCHARACTERIZED |
PMEG.utg000167l.201 | ALPHA-L-FUCOSIDASE |
PMEG.utg000167l.202 | RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN |
PMEG.utg000167l.203 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
PMEG.utg000167l.204 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |