The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000169l.127 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
PMEG.utg000169l.128 | UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN |
PMEG.utg000169l.129 | GTP CYCLOHYDROLASE I |
PMEG.utg000169l.13 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
PMEG.utg000169l.130 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED |
PMEG.utg000169l.131 | MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER |
PMEG.utg000169l.132 | RBM25 PROTEIN |
PMEG.utg000169l.133 | MYOSIN LIGHT CHAIN 1, 3 |
PMEG.utg000169l.134 | |
PMEG.utg000169l.135 | STRIATIN |
PMEG.utg000169l.136 | SIMILAR TO HYPOTHETICAL PROTEIN FLJ40298 |
PMEG.utg000169l.137 | |
PMEG.utg000169l.138 | INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG |
PMEG.utg000169l.139 | |
PMEG.utg000169l.14 | FIBROUS SHEATH INTERACTING PROTEIN 1 |
PMEG.utg000169l.140 | PROTEIN DISPATCHED-RELATED |
PMEG.utg000169l.141 | MYOSIN REGULATORY LIGHT CHAIN 2 |
PMEG.utg000169l.142 | F-BOX ONLY PROTEIN |
PMEG.utg000169l.143 | SERINE/THREONINE PROTEIN PHOSPHATASE |
PMEG.utg000169l.144 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
PMEG.utg000169l.145 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
PMEG.utg000169l.146 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
PMEG.utg000169l.147 | C1ORF73 PROTEIN |
PMEG.utg000169l.148 | COMM DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000169l.149 | UDP/ADP-SUGAR PYROPHOSPHATASE |
PMEG.utg000169l.15 | MELANOMA INHIBITORY ACTIVITY-RELATED |
PMEG.utg000169l.150 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
PMEG.utg000169l.151 | SYNAPTOTAGMIN |
PMEG.utg000169l.152 | DYNEIN REGULATORY COMPLEX SUBUNIT 7 |
PMEG.utg000169l.153 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
PMEG.utg000169l.154 | GTP CYCLOHYDROLASE 1 FEEDBACK REGULATORY PROTEIN |
PMEG.utg000169l.155 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
PMEG.utg000169l.156 | 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE |
PMEG.utg000169l.157 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000169l.16 | RPA-RELATED PROTEIN RADX |
PMEG.utg000169l.17 | CENTROSOMAL PROTEIN KIZUNA |
PMEG.utg000169l.18 | RRP15-LIKE PROTEIN |
PMEG.utg000169l.19 | DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED |
PMEG.utg000169l.2 | PROTEASOME SUBUNIT ALPHA/BETA |
PMEG.utg000169l.20 | CYTOKINE RECEPTOR |
PMEG.utg000169l.21 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
PMEG.utg000169l.22 | TRIOKINASE/FMN CYCLASE |
PMEG.utg000169l.23 | VISUAL SYSTEM HOMEOBOX 2 |
PMEG.utg000169l.24 | VISUAL SYSTEM HOMEOBOX 2 |
PMEG.utg000169l.25 | CONSORTIN |
PMEG.utg000169l.26 | PHOSPHOLIPASE D - RELATED |
PMEG.utg000169l.27 | CALCIUM BINDING PROTEIN |
PMEG.utg000169l.28 | TETRASPANIN |
PMEG.utg000169l.29 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
PMEG.utg000169l.3 | UNCHARACTERIZED |