The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000169l.76 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
| PMEG.utg000169l.77 | LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN |
| PMEG.utg000169l.78 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
| PMEG.utg000169l.79 | PHD FINGER PROTEIN |
| PMEG.utg000169l.8 | CYCLIN |
| PMEG.utg000169l.80 | RHO FAMILY GTPASE |
| PMEG.utg000169l.81 | RING ZINC FINGER PROTEIN |
| PMEG.utg000169l.82 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| PMEG.utg000169l.83 | PROTEIN MAX MYC-ASSOCIATED FACTOR X |
| PMEG.utg000169l.84 | ALPHA- 1,6 -FUCOSYLTRANSFERASE |
| PMEG.utg000169l.85 | MITOCHONDRIAL GENOME MAINTENANCE EXONUCLEASE 1 |
| PMEG.utg000169l.86 | UNCHARACTERIZED |
| PMEG.utg000169l.87 | HIGH MOBILITY GROUP B PROTEIN 12-RELATED |
| PMEG.utg000169l.88 | |
| PMEG.utg000169l.89 | WD-40 REPEAT PROTEIN |
| PMEG.utg000169l.9 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| PMEG.utg000169l.90 | COILED-COIL DOMAIN CONTAINING PROTEIN 9 |
| PMEG.utg000169l.91 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| PMEG.utg000169l.92 | RUBY-EYE2-LIKE PROTEIN |
| PMEG.utg000169l.93 | BEIGE/BEACH-RELATED |
| PMEG.utg000169l.94 | SIMILAR TO RIKEN CDNA 2310022B05 |
| PMEG.utg000169l.95 | PUTATIVE PHOSPHOTRANSFERASE |
| PMEG.utg000169l.96 | WD REPEAT-CONTAINING PROTEIN 81 |
| PMEG.utg000169l.97 | EXPORTIN 1/5 |
| PMEG.utg000169l.98 | METAL-SULFUR CLUSTER BIOSYNTHESIS PROTEINS YUAD-RELATED |
| PMEG.utg000169l.99 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
| PMEG.utg000170l.10 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000170l.11 | METHYLTRANSFERASE TYPE 11 |
| PMEG.utg000170l.14 | MIR DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000170l.15 | |
| PMEG.utg000170l.16 | |
| PMEG.utg000170l.17 | |
| PMEG.utg000170l.18 | |
| PMEG.utg000170l.19 | |
| PMEG.utg000170l.2 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN |
| PMEG.utg000170l.20 | |
| PMEG.utg000170l.21 | |
| PMEG.utg000170l.22 | |
| PMEG.utg000170l.23 | |
| PMEG.utg000170l.24 | NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE |
| PMEG.utg000170l.25 | |
| PMEG.utg000170l.26 | |
| PMEG.utg000170l.27 | SERINE/THREONINE-PROTEIN KINASE TAO |
| PMEG.utg000170l.28 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
| PMEG.utg000170l.29 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
| PMEG.utg000170l.3 | SULFOQUINOVOSIDASE |
| PMEG.utg000170l.30 | |
| PMEG.utg000170l.4 | |
| PMEG.utg000170l.5 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000170l.6 | INTEGRIN BETA SUBUNIT |
