The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000179l.42 | SOLUBLE NSF ATTACHMENT PROTEIN SNAP |
PMEG.utg000179l.43 | ACYL-COA THIOESTERASE |
PMEG.utg000179l.44 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
PMEG.utg000179l.45 | |
PMEG.utg000179l.46 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
PMEG.utg000179l.47 | T-BOX PROTEIN-RELATED |
PMEG.utg000179l.48 | T-BOX PROTEIN-RELATED |
PMEG.utg000179l.49 | RAS-RELATED PROTEIN RAB |
PMEG.utg000179l.5 | TRANSMEMBRANE PROTEIN 143 FAMILY MEMBER |
PMEG.utg000179l.50 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
PMEG.utg000179l.51 | SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED |
PMEG.utg000179l.6 | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 |
PMEG.utg000179l.7 | GENETIC SUPPRESSOR ELEMENT 1 |
PMEG.utg000179l.8 | ANKYRIN REPEAT PROTEIN |
PMEG.utg000179l.9 | METALLOPROTEASE TLDD |
PMEG.utg000180l.1 | SENTRIN/SUMO-SPECIFIC PROTEASE |
PMEG.utg000180l.2 | BETA-GLUCURONIDASE |
PMEG.utg000181l.1 | UNCHARACTERIZED |
PMEG.utg000181l.2 | ZGC:158260 |
PMEG.utg000181l.3 | TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1 |
PMEG.utg000181l.4 | |
PMEG.utg000181l.5 | CHLORIDE CHANNEL PROTEIN |
PMEG.utg000183l.1 | PCD6 INTERACTING PROTEIN-RELATED |
PMEG.utg000183l.2 | OVOCHYMASE-RELATED |
PMEG.utg000183l.3 | |
PMEG.utg000184l.2 | CYTOCHROME P450 FAMILY 3 |
PMEG.utg000184l.3 | |
PMEG.utg000184l.4 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
PMEG.utg000184l.5 | CADHERIN-87A |
PMEG.utg000184l.6 | CADHERIN-23 |
PMEG.utg000185l.1 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000185l.10 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
PMEG.utg000185l.100 | |
PMEG.utg000185l.101 | TPR REPEAT CONTAINING PROTEIN |
PMEG.utg000185l.102 | TRNA MODIFICATION GTPASE GTPBP3 |
PMEG.utg000185l.103 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
PMEG.utg000185l.104 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 |
PMEG.utg000185l.105 | CHAPERONIN |
PMEG.utg000185l.106 | DNA-3-METHYLADENINE GLYCOSYLASE |
PMEG.utg000185l.107 | PROTEIN UNC-13 HOMOLOG |
PMEG.utg000185l.11 | AMMONIUM TRANSPORTER |
PMEG.utg000185l.12 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000185l.13 | BIFUNCTIONAL TH2 PROTEIN |
PMEG.utg000185l.14 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S27 |
PMEG.utg000185l.15 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000185l.16 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000185l.17 | |
PMEG.utg000185l.18 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
PMEG.utg000185l.19 | TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 2 |
PMEG.utg000185l.2 | ERGOTHIONEINE BIOSYNTHESIS PROTEIN 1 |