About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000179l.42SOLUBLE NSF ATTACHMENT PROTEIN SNAP
PMEG.utg000179l.43ACYL-COA THIOESTERASE
PMEG.utg000179l.44CONNECTIVE TISSUE GROWTH FACTOR-RELATED
PMEG.utg000179l.45
PMEG.utg000179l.46DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
PMEG.utg000179l.47T-BOX PROTEIN-RELATED
PMEG.utg000179l.48T-BOX PROTEIN-RELATED
PMEG.utg000179l.49RAS-RELATED PROTEIN RAB
PMEG.utg000179l.5TRANSMEMBRANE PROTEIN 143 FAMILY MEMBER
PMEG.utg000179l.50MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
PMEG.utg000179l.51SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED
PMEG.utg000179l.6DNA REPLICATION COMPLEX GINS PROTEIN PSF2
PMEG.utg000179l.7GENETIC SUPPRESSOR ELEMENT 1
PMEG.utg000179l.8ANKYRIN REPEAT PROTEIN
PMEG.utg000179l.9METALLOPROTEASE TLDD
PMEG.utg000180l.1SENTRIN/SUMO-SPECIFIC PROTEASE
PMEG.utg000180l.2BETA-GLUCURONIDASE
PMEG.utg000181l.1UNCHARACTERIZED
PMEG.utg000181l.2ZGC:158260
PMEG.utg000181l.3TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1
PMEG.utg000181l.4
PMEG.utg000181l.5CHLORIDE CHANNEL PROTEIN
PMEG.utg000183l.1PCD6 INTERACTING PROTEIN-RELATED
PMEG.utg000183l.2OVOCHYMASE-RELATED
PMEG.utg000183l.3
PMEG.utg000184l.2CYTOCHROME P450 FAMILY 3
PMEG.utg000184l.3
PMEG.utg000184l.4E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
PMEG.utg000184l.5CADHERIN-87A
PMEG.utg000184l.6CADHERIN-23
PMEG.utg000185l.1SRCR DOMAIN-CONTAINING PROTEIN
PMEG.utg000185l.10CYSTEINE-RICH SECRETORY PROTEIN-RELATED
PMEG.utg000185l.100
PMEG.utg000185l.101TPR REPEAT CONTAINING PROTEIN
PMEG.utg000185l.102TRNA MODIFICATION GTPASE GTPBP3
PMEG.utg000185l.103DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
PMEG.utg000185l.104U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10
PMEG.utg000185l.105CHAPERONIN
PMEG.utg000185l.106DNA-3-METHYLADENINE GLYCOSYLASE
PMEG.utg000185l.107PROTEIN UNC-13 HOMOLOG
PMEG.utg000185l.11AMMONIUM TRANSPORTER
PMEG.utg000185l.12CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
PMEG.utg000185l.13BIFUNCTIONAL TH2 PROTEIN
PMEG.utg000185l.14MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S27
PMEG.utg000185l.15ALPHA KINASE/ELONGATION FACTOR 2 KINASE
PMEG.utg000185l.16ALPHA KINASE/ELONGATION FACTOR 2 KINASE
PMEG.utg000185l.17
PMEG.utg000185l.18G PROTEIN-COUPLED RECEPTOR 157-RELATED
PMEG.utg000185l.19TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 2
PMEG.utg000185l.2ERGOTHIONEINE BIOSYNTHESIS PROTEIN 1
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