The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000185l.20 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000185l.21 | ATP-DEPENDENT RNA HELICASE |
PMEG.utg000185l.22 | - |
PMEG.utg000185l.23 | |
PMEG.utg000185l.24 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT J |
PMEG.utg000185l.25 | PROTEIN FAM221A-RELATED |
PMEG.utg000185l.26 | ALDEHYDE DEHYDROGENASE-RELATED |
PMEG.utg000185l.27 | MATRIX PROTEIN, PUTATIVE-RELATED |
PMEG.utg000185l.28 | STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL |
PMEG.utg000185l.29 | ADP-DEPENDENT GLUCOKINASE |
PMEG.utg000185l.3 | F-BOX ONLY PROTEIN 33 |
PMEG.utg000185l.30 | |
PMEG.utg000185l.31 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
PMEG.utg000185l.32 | ARRESTIN DOMAIN CONTAINING PROTEIN |
PMEG.utg000185l.33 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
PMEG.utg000185l.34 | AGAP011099-PA |
PMEG.utg000185l.35 | CHITIN SYNTHASE |
PMEG.utg000185l.36 | ALKALINE PHOSPHATASE |
PMEG.utg000185l.37 | GLUCOSE-6-PHOSPHATASE |
PMEG.utg000185l.38 | REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED |
PMEG.utg000185l.39 | KELCH DOMAIN-CONTAINING PROTEIN |
PMEG.utg000185l.4 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000185l.40 | IMPORTIN-7, 8, 11 |
PMEG.utg000185l.41 | - |
PMEG.utg000185l.42 | F-BOX/WD REPEAT-CONTAINING PROTEIN 2 |
PMEG.utg000185l.43 | TYROSINE-PROTEIN KINASE |
PMEG.utg000185l.44 | LIPOCALIN-RELATED PROTEIN-RELATED |
PMEG.utg000185l.46 | ANKYRIN REPEAT FAMILY A |
PMEG.utg000185l.47 | 4.1 G PROTEIN |
PMEG.utg000185l.48 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000185l.49 | VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE |
PMEG.utg000185l.5 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 15 |
PMEG.utg000185l.50 | SERINE/THREONINE-PROTEIN KINASE 17 |
PMEG.utg000185l.51 | SERUM RESPONSE FACTOR HOMOLOG |
PMEG.utg000185l.52 | UNCHARACTERIZED |
PMEG.utg000185l.53 | CASEIN KINASE-RELATED |
PMEG.utg000185l.54 | DNA REPAIR PROTEIN REV1 |
PMEG.utg000185l.55 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |
PMEG.utg000185l.56 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
PMEG.utg000185l.57 | PHOSPHOMEVALONATE KINASE |
PMEG.utg000185l.58 | ANKYRIN REPEAT CONTAINING |
PMEG.utg000185l.59 | CYTOKINE RECEPTOR |
PMEG.utg000185l.6 | R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG |
PMEG.utg000185l.60 | CONTACTIN 5 |
PMEG.utg000185l.61 | CONTACTIN 5 |
PMEG.utg000185l.62 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000185l.63 | D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH |
PMEG.utg000185l.64 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000185l.65 | UNCHARACTERIZED |
PMEG.utg000185l.66 |