The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000187l.7 | CYTOCHROME P450 FAMILY 7 |
PMEG.utg000187l.8 | 2-HACID_DH_C DOMAIN-CONTAINING PROTEIN |
PMEG.utg000187l.9 | YALI0E30327P |
PMEG.utg000188l.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
PMEG.utg000188l.2 | SULFATE TRANSPORTER |
PMEG.utg000188l.3 | SERINE/THREONINE-PROTEIN KINASE |
PMEG.utg000188l.4 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
PMEG.utg000189l.1 | CADHERIN-23 |
PMEG.utg000189l.10 | - |
PMEG.utg000189l.11 | PHOSPHATE TRANSPORTER |
PMEG.utg000189l.12 | |
PMEG.utg000189l.13 | TRANSCRIPTION FACTOR E2F |
PMEG.utg000189l.14 | TRANSCRIPTION FACTOR E2F |
PMEG.utg000189l.15 | DIOXYGENASE RV0097-RELATED |
PMEG.utg000189l.16 | PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE |
PMEG.utg000189l.17 | |
PMEG.utg000189l.18 | CEREBRAL PROTEIN-11-RELATED |
PMEG.utg000189l.2 | - |
PMEG.utg000189l.3 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
PMEG.utg000189l.4 | NICOTINATE PHOSPHORIBOSYLTRANSFERASE |
PMEG.utg000189l.5 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
PMEG.utg000189l.6 | UNCHARACTERIZED |
PMEG.utg000189l.7 | |
PMEG.utg000189l.8 | TRANSLOCATION ASSOCIATED MEMBRANE PROTEIN |
PMEG.utg000189l.9 | CALCIUM BINDING PROTEIN |
PMEG.utg000190l.1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
PMEG.utg000190l.10 | TRANSMEMBRANE PROTEIN 128 |
PMEG.utg000190l.11 | BNIP1-RELATED |
PMEG.utg000190l.12 | NUCLEAR RECEPTOR BINDING FACTOR 2 |
PMEG.utg000190l.13 | E3 UBIQUITIN-PROTEIN LIGASE RNF103 |
PMEG.utg000190l.14 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
PMEG.utg000190l.15 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000190l.16 | RING ZINC FINGER PROTEIN |
PMEG.utg000190l.17 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
PMEG.utg000190l.18 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
PMEG.utg000190l.19 | |
PMEG.utg000190l.2 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000190l.20 | EXPORTIN 4,7-RELATED |
PMEG.utg000190l.21 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
PMEG.utg000190l.22 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
PMEG.utg000190l.23 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
PMEG.utg000190l.24 | |
PMEG.utg000190l.25 | LIM DOMAIN-BINDING PROTEIN |
PMEG.utg000190l.26 | ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBER |
PMEG.utg000190l.27 | FIBRONECTIN TYPE 3 AND ANKYRIN REPEAT DOMAINS PROTEIN 1 |
PMEG.utg000190l.3 | PSEUDOURIDYLATE SYNTHASE |
PMEG.utg000190l.4 | C-TERMINAL-BINDING PROTEIN |
PMEG.utg000190l.5 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
PMEG.utg000190l.6 | TESTIS-EXPRESSED PROTEIN 36 |
PMEG.utg000190l.7 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |