About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000170l.7SLR1189 PROTEIN
PMEG.utg000170l.8
PMEG.utg000170l.9
PMEG.utg000172l.1TRANSCRIPTION INITIATION FACTOR TFIID
PMEG.utg000172l.2CALCIUM-BINDING PROTEIN 8-RELATED
PMEG.utg000172l.3HYCCIN RELATED
PMEG.utg000175l.1SHIPPO-1-RELATED
PMEG.utg000175l.2LD22376P
PMEG.utg000176l.1PROTEIN CBG12474
PMEG.utg000176l.10HISTIDINE-RICH CALCIUM-BINDING PROTEIN-RELATED
PMEG.utg000176l.11AGAP001705-PA
PMEG.utg000176l.12JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN
PMEG.utg000176l.13HELICASE RELATED
PMEG.utg000176l.14UBIQUITIN-ACTIVATING ENZYME E1
PMEG.utg000176l.15HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
PMEG.utg000176l.16CYSTEINE PROTEASE FAMILY C1-RELATED
PMEG.utg000176l.17ZINC FINGER PROTEIN
PMEG.utg000176l.18PROBABLE MEMBRANE PROTEIN DUF221-RELATED
PMEG.utg000176l.19TYROSINE-PROTEIN PHOSPHATASE
PMEG.utg000176l.2TIGHT JUNCTION-ASSOCIATED PROTEIN 1
PMEG.utg000176l.20CMF/LEK/CENP CELL DIVISION-RELATED
PMEG.utg000176l.21CHAPERONIN
PMEG.utg000176l.22SLIT HOMOLOG
PMEG.utg000176l.23DULLARD PROTEIN PHOSPHATASE
PMEG.utg000176l.24
PMEG.utg000176l.25UNCHARACTERIZED
PMEG.utg000176l.26PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
PMEG.utg000176l.27CATION TRANSPORT PROTEIN CHAC-RELATED
PMEG.utg000176l.28ACYL-COENZYME A THIOESTERASE-RELATED
PMEG.utg000176l.29ENDO-BETA-1,4-MANNANASE
PMEG.utg000176l.3PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
PMEG.utg000176l.30ACYL-COENZYME A THIOESTERASE-RELATED
PMEG.utg000176l.31LEUCINE RICH REPEAT FAMILY PROTEIN
PMEG.utg000176l.32CHITINASE
PMEG.utg000176l.33CHITINASE
PMEG.utg000176l.34HEAT SHOCK PROTEIN 90 FAMILY MEMBER
PMEG.utg000176l.35YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN
PMEG.utg000176l.36ALPHA-AMYLASE FAMILY MEMBER
PMEG.utg000176l.37FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED
PMEG.utg000176l.38DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN
PMEG.utg000176l.39GOLGIN-84
PMEG.utg000176l.4PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
PMEG.utg000176l.40SOLUBLE NSF ATTACHMENT PROTEIN SNAP
PMEG.utg000176l.41TYROSINE-PROTEIN KINASE RECEPTOR
PMEG.utg000176l.42TGF-BETA FAMILY
PMEG.utg000176l.43WD40 REPEAT PROTEIN
PMEG.utg000176l.44TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
PMEG.utg000176l.45SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
PMEG.utg000176l.46ZINC FINGER PROTEIN 839
PMEG.utg000176l.47MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
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