The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000200l.55 | RING BOX |
| PMEG.utg000200l.56 | LEUCINE RICH REPEAT PROTEIN |
| PMEG.utg000200l.57 | UNCHARACTERIZED |
| PMEG.utg000200l.58 | TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT |
| PMEG.utg000200l.59 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| PMEG.utg000200l.6 | SEMAPHORIN |
| PMEG.utg000200l.60 | |
| PMEG.utg000200l.61 | NUDIX HYDROLASE, NUDC SUBFAMILY |
| PMEG.utg000200l.62 | BETA-HEXOSAMINIDASE |
| PMEG.utg000200l.63 | ANOCTAMIN |
| PMEG.utg000200l.64 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| PMEG.utg000200l.65 | DNA POLYMERASE SUBUNIT GAMMA-1 |
| PMEG.utg000200l.66 | DNA POLYMERASE SUBUNIT GAMMA-1 |
| PMEG.utg000200l.67 | SRCR DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000200l.68 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000200l.69 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000200l.7 | NADH-UBIQUINONE OXIDOREDUCTASE |
| PMEG.utg000200l.70 | |
| PMEG.utg000200l.71 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
| PMEG.utg000200l.72 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| PMEG.utg000200l.73 | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP |
| PMEG.utg000200l.74 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| PMEG.utg000200l.75 | POTASSIUM CHANNEL, SUBFAMILY K |
| PMEG.utg000200l.76 | POTASSIUM CHANNEL, SUBFAMILY K |
| PMEG.utg000200l.77 | ANKYRIN REPEAT FAMILY PROTEIN |
| PMEG.utg000200l.78 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| PMEG.utg000200l.79 | TRANSDUCIN-LIKE ENHANCER PROTEIN |
| PMEG.utg000200l.8 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| PMEG.utg000200l.80 | TRANSDUCIN-LIKE ENHANCER PROTEIN |
| PMEG.utg000200l.9 | |
| PMEG.utg000201l.1 | NNMT/PNMT/TEMT FAMILY MEMBER |
| PMEG.utg000201l.10 | HEPARANASE |
| PMEG.utg000201l.11 | - |
| PMEG.utg000201l.12 | |
| PMEG.utg000201l.13 | |
| PMEG.utg000201l.14 | - |
| PMEG.utg000201l.2 | DOCKING PROTEIN RELATED |
| PMEG.utg000201l.3 | ADULT RETINA PROTEIN |
| PMEG.utg000201l.4 | PHOSPHATIDYLINOSITOL 4-KINASE TYPE-II |
| PMEG.utg000201l.5 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| PMEG.utg000201l.6 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| PMEG.utg000201l.7 | |
| PMEG.utg000201l.8 | TRANSCRIPTION FACTOR MLR1/2 |
| PMEG.utg000201l.9 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| PMEG.utg000202l.1 | |
| PMEG.utg000202l.2 | |
| PMEG.utg000202l.3 | |
| PMEG.utg000202l.4 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
| PMEG.utg000202l.5 | NEPHRIN |
| PMEG.utg000203l.1 | CARNITINE O-ACYLTRANSFERASE |
