The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000207l.19 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5 |
PMEG.utg000207l.2 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
PMEG.utg000207l.20 | METHYLTRANSFERASE TYPE 11 |
PMEG.utg000207l.21 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000207l.22 | UNCHARACTERIZED |
PMEG.utg000207l.23 | RIBITOL-5-PHOSPHATE XYLOSYLTRANSFERASE 1 |
PMEG.utg000207l.24 | THUMP DOMAIN-CONTAINING |
PMEG.utg000207l.25 | DNA REPAIR PROTEIN XP-C / RAD4 |
PMEG.utg000207l.26 | ELECTRON TRANSPORT OXIDOREDUCTASE |
PMEG.utg000207l.27 | |
PMEG.utg000207l.28 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
PMEG.utg000207l.29 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
PMEG.utg000207l.3 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000207l.30 | THREONINE SYNTHASE-LIKE 1 |
PMEG.utg000207l.31 | |
PMEG.utg000207l.33 | ACTIN |
PMEG.utg000207l.34 | UNCHARACTERIZED |
PMEG.utg000207l.35 | IMIDAZOLONEPROPIONASE |
PMEG.utg000207l.36 | |
PMEG.utg000207l.37 | |
PMEG.utg000207l.38 | |
PMEG.utg000207l.39 | |
PMEG.utg000207l.4 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000207l.40 | |
PMEG.utg000207l.41 | F-BOX ONLY PROTEIN 15 |
PMEG.utg000207l.42 | NICOLIN 1 |
PMEG.utg000207l.43 | F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA |
PMEG.utg000207l.44 | |
PMEG.utg000207l.6 | VPRBP PROTEIN-RELATED |
PMEG.utg000207l.7 | ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000207l.8 | |
PMEG.utg000207l.9 | ELKS/RAB6-INTERACTING/CAST PROTEIN |
PMEG.utg000208l.1 | NUCLEAR PORE COMPLEX PROTEIN NUP133 |
PMEG.utg000208l.10 | TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 |
PMEG.utg000208l.100 | DNA REPAIR PROTEIN RAD51 HOMOLOG 2 |
PMEG.utg000208l.101 | CCCH ZINC FINGER/TIS11-RELATED |
PMEG.utg000208l.102 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
PMEG.utg000208l.103 | PLEKHH PROTEIN |
PMEG.utg000208l.104 | CELL DIVISION CYCLE ASSOCIATED PROTEIN 4/SERTA DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000208l.105 | BLR2807 PROTEIN |
PMEG.utg000208l.106 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
PMEG.utg000208l.107 | DNAJ HOMOLOG SUBFAMILY C MEMBER 4 |
PMEG.utg000208l.108 | TYROSINE-PROTEIN KINASE RECEPTOR |
PMEG.utg000208l.109 | DNAJ HOMOLOG SUBFAMILY C MEMBER 4 |
PMEG.utg000208l.11 | DNA-DIRECTED RNA POLYMERASE II, III |
PMEG.utg000208l.110 | SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN |
PMEG.utg000208l.111 | CRYPTOCHROME |
PMEG.utg000208l.113 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
PMEG.utg000208l.114 | INOSITOL POLYPHOSPHATE KINASE |
PMEG.utg000208l.115 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |