The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000219l.138 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
PMEG.utg000219l.139 | PROTEASOME SUBUNIT ALPHA/BETA |
PMEG.utg000219l.14 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000219l.140 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
PMEG.utg000219l.141 | XANTHINE DEHYDROGENASE |
PMEG.utg000219l.142 | TIPA |
PMEG.utg000219l.143 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000219l.144 | UBX DOMAIN-CONTAINING PROTEIN 4 |
PMEG.utg000219l.145 | SOWAH (DROSOPHILA) HOMOLOG |
PMEG.utg000219l.146 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
PMEG.utg000219l.147 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
PMEG.utg000219l.148 | NGFI-A BINDING PROTEIN |
PMEG.utg000219l.149 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED |
PMEG.utg000219l.15 | BAX INHIBITOR-RELATED |
PMEG.utg000219l.150 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
PMEG.utg000219l.151 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
PMEG.utg000219l.152 | MCG48959-RELATED |
PMEG.utg000219l.153 | SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER |
PMEG.utg000219l.154 | PEPTIDYL-TRNA HYDROLASE |
PMEG.utg000219l.155 | PNAS-3 RELATED |
PMEG.utg000219l.156 | PROTEIN BARK BEETLE |
PMEG.utg000219l.157 | HEDGEHOG-INTERACTING PROTEIN |
PMEG.utg000219l.158 | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN |
PMEG.utg000219l.159 | TYROSINE-PROTEIN KINASE |
PMEG.utg000219l.16 | CLASP |
PMEG.utg000219l.160 | PROTEIN ODR-4 HOMOLOG |
PMEG.utg000219l.161 | 50S/60S RIBOSOMAL PROTEIN L14/L23 |
PMEG.utg000219l.162 | BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED |
PMEG.utg000219l.163 | UNCHARACTERIZED |
PMEG.utg000219l.164 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
PMEG.utg000219l.165 | SOLUTE CARRIER FAMILY 5 |
PMEG.utg000219l.166 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000219l.17 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
PMEG.utg000219l.18 | VACUOLAR PROTEIN SORTING VPS16 |
PMEG.utg000219l.19 | METHIONINE--TRNA LIGASE |
PMEG.utg000219l.2 | UNCHARACTERIZED |
PMEG.utg000219l.20 | SELENOPROTEIN O |
PMEG.utg000219l.21 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
PMEG.utg000219l.22 | SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION |
PMEG.utg000219l.23 | CHAPERONIN |
PMEG.utg000219l.24 | TESTIS-EXPRESSED PROTEIN 49 |
PMEG.utg000219l.25 | GUANYLYL CYCLASE |
PMEG.utg000219l.26 | SMARCE1 REGULATOR OF CHROMATIN |
PMEG.utg000219l.27 | DNA REPLICATION REGULATOR DPB11-RELATED |
PMEG.utg000219l.28 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |
PMEG.utg000219l.29 | KELCH PROTEIN |
PMEG.utg000219l.3 | AQUAPORIN TRANSPORTER |
PMEG.utg000219l.30 | |
PMEG.utg000219l.31 | DI-N-ACETYLCHITOBIASE |
PMEG.utg000219l.32 | ATP-DEPENDENT RNA HELICASE |