The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000208l.91 | TNF RECEPTOR ASSOCIATED FACTOR |
PMEG.utg000208l.92 | TNF RECEPTOR ASSOCIATED FACTOR |
PMEG.utg000208l.93 | ZINC FINGER PROTEIN-LIKE 1 |
PMEG.utg000208l.94 | ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE |
PMEG.utg000208l.95 | TYROSINE-PROTEIN KINASE RECEPTOR |
PMEG.utg000208l.96 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000208l.97 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000208l.98 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000208l.99 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000209l.1 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
PMEG.utg000209l.2 | TYROSINE-PROTEIN KINASE |
PMEG.utg000209l.3 | ERO1-RELATED |
PMEG.utg000209l.4 | TYROSYL-DNA PHOSPHODIESTERASE 1 |
PMEG.utg000209l.5 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 70 |
PMEG.utg000209l.6 | D-TYROSYL-TRNA TYR DEACYLASE |
PMEG.utg000209l.7 | CLASP |
PMEG.utg000209l.8 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
PMEG.utg000209l.9 | CELL GROWTH REGULATOR WITH RING FINGER DOMAIN PROTEIN 1 |
PMEG.utg000210l.1 | UNCHARACTERIZED |
PMEG.utg000210l.10 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000210l.11 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000210l.12 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
PMEG.utg000210l.13 | MITOGEN-ACTIVATED PROTEIN KINASE |
PMEG.utg000210l.14 | SIDESTEP PROTEIN |
PMEG.utg000210l.15 | REPLICATION PROTEIN A-RELATED |
PMEG.utg000210l.16 | ALPHA-GLUCOSIDASE |
PMEG.utg000210l.17 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
PMEG.utg000210l.18 | ACETYL-COA C-ACETYLTRANSFERASE |
PMEG.utg000210l.19 | HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2 |
PMEG.utg000210l.2 | POTE ANKYRIN DOMAIN |
PMEG.utg000210l.20 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN |
PMEG.utg000210l.21 | HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2 |
PMEG.utg000210l.22 | ATP-DEPENDENT RNA HELICASE DBP3 |
PMEG.utg000210l.23 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
PMEG.utg000210l.24 | UPF0600 PROTEIN C5ORF51 |
PMEG.utg000210l.25 | LYSINE-SPECIFIC DEMETHYLASE |
PMEG.utg000210l.26 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
PMEG.utg000210l.27 | SYNTENIN RELATED |
PMEG.utg000210l.28 | TYROSINE-PROTEIN KINASE |
PMEG.utg000210l.29 | RAB6A-GEF COMPLEX PARTNER PROTEIN 1 |
PMEG.utg000210l.3 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E |
PMEG.utg000210l.30 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
PMEG.utg000210l.31 | SORTING NEXIN-4 |
PMEG.utg000210l.32 | SOSS COMPLEX SUBUNIT C |
PMEG.utg000210l.33 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
PMEG.utg000210l.34 | RETICULOCALBIN |
PMEG.utg000210l.35 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
PMEG.utg000210l.36 | KRAB DOMAIN C2H2 ZINC FINGER |
PMEG.utg000210l.37 | RIBOSOMAL PROTEIN S6 KINASE |
PMEG.utg000210l.4 | UNCHARACTERIZED |