The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000222l.14 | UNCHARACTERIZED |
| PMEG.utg000222l.15 | NNMT/PNMT/TEMT FAMILY MEMBER |
| PMEG.utg000222l.16 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000222l.2 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| PMEG.utg000222l.3 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| PMEG.utg000222l.4 | ZINC FINGER PROTEIN |
| PMEG.utg000222l.5 | ZINC FINGER PROTEIN ZIC AND GLI |
| PMEG.utg000222l.6 | MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED |
| PMEG.utg000222l.7 | |
| PMEG.utg000222l.8 | SERINE/THREONINE-PROTEIN KINASE 17 |
| PMEG.utg000222l.9 | 40S RIBOSOMAL PROTEIN S26 |
| PMEG.utg000223l.1 | TIGHT JUNCTION PROTEIN |
| PMEG.utg000223l.2 | COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER |
| PMEG.utg000223l.3 | 50S RIBOSOMAL PROTEIN L9 |
| PMEG.utg000223l.4 | BONUS, ISOFORM C-RELATED |
| PMEG.utg000223l.5 | |
| PMEG.utg000223l.6 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| PMEG.utg000224l.1 | SHC TRANSFORMING PROTEIN |
| PMEG.utg000224l.10 | HELICASE WITH DEATH DOMAIN-RELATED |
| PMEG.utg000224l.12 | BRYOPORIN |
| PMEG.utg000224l.13 | |
| PMEG.utg000224l.14 | SCAVENGER RECEPTOR CLASS F |
| PMEG.utg000224l.2 | HYDROXYSTEROID (11-BETA) DEHYDROGENASE 1-LIKE B-RELATED |
| PMEG.utg000224l.3 | MICOS COMPLEX SUBUNIT MIC13 |
| PMEG.utg000224l.4 | - |
| PMEG.utg000224l.5 | - |
| PMEG.utg000224l.6 | BETA-HEXOSAMINIDASE |
| PMEG.utg000224l.7 | BETA-HEXOSAMINIDASE |
| PMEG.utg000224l.8 | ECDYSONE-INDUCIBLE GENE E1, ISOFORM A |
| PMEG.utg000224l.9 | |
| PMEG.utg000225l.1 | NUCLEOPLASMIN |
| PMEG.utg000225l.10 | MATRIX METALLOPROTEINASE |
| PMEG.utg000225l.11 | UROPORPHYRINOGEN III SYNTHASE |
| PMEG.utg000225l.12 | |
| PMEG.utg000225l.2 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| PMEG.utg000225l.3 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000225l.4 | DEFERROCHELATASE/PEROXIDASE |
| PMEG.utg000225l.5 | HOMEOBOX PROTEIN HHEX |
| PMEG.utg000225l.6 | SCHLAFEN |
| PMEG.utg000225l.7 | SUCCINYL-COA LIGASE SUBUNIT ALPHA |
| PMEG.utg000225l.8 | |
| PMEG.utg000225l.9 | CYTOCHROME P450 26 |
| PMEG.utg000226l.1 | NUCLEAR RECEPTOR COACTIVATOR |
| PMEG.utg000226l.10 | 40S RIBOSOMAL PROTEIN S8 |
| PMEG.utg000226l.11 | LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED |
| PMEG.utg000226l.12 | BETA1,3-GALACTOSYLTRANSFERASE |
| PMEG.utg000226l.13 | SI:DKEY-19B23.12-RELATED |
| PMEG.utg000226l.14 | PROTEIN FAM167A |
| PMEG.utg000226l.15 | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN |
| PMEG.utg000226l.16 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
