The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000236l.2 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000236l.20 | ALZHEIMER'S DISEASE BETA-AMYLOID RELATED |
| PMEG.utg000236l.21 | SOLUTE CARRIER FAMILY 17 |
| PMEG.utg000236l.22 | UNCHARACTERIZED |
| PMEG.utg000236l.23 | EGALITARIAN, ISOFORM B |
| PMEG.utg000236l.24 | SID1 TRANSMEMBRANE FAMILY MEMEBER |
| PMEG.utg000236l.25 | KNIRPS-RELATED PROTEIN-RELATED |
| PMEG.utg000236l.26 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2 |
| PMEG.utg000236l.27 | GLYCOGEN SYNTHASE KINASE-3 ALPHA |
| PMEG.utg000236l.28 | - |
| PMEG.utg000236l.29 | PEROXISOMAL BIOGENESIS FACTOR 19 |
| PMEG.utg000236l.3 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000236l.30 | ETS |
| PMEG.utg000236l.31 | ETS |
| PMEG.utg000236l.32 | PERSULFIDE DIOXYGENASE ETHE1 |
| PMEG.utg000236l.33 | SORBITOL DEHYDROGENASE |
| PMEG.utg000236l.34 | SORBITOL DEHYDROGENASE |
| PMEG.utg000236l.35 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| PMEG.utg000236l.36 | ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT |
| PMEG.utg000236l.37 | PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1 |
| PMEG.utg000236l.38 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000236l.39 | RIBOSOMAL PROTEIN L17 |
| PMEG.utg000236l.4 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000236l.40 | BESTROPHIN |
| PMEG.utg000236l.41 | TREHALASE |
| PMEG.utg000236l.42 | |
| PMEG.utg000236l.43 | A1 CISTRON SPLICING FACTOR AAR2-RELATED |
| PMEG.utg000236l.44 | CBL |
| PMEG.utg000236l.45 | UNCHARACTERIZED |
| PMEG.utg000236l.46 | UNCHARACTERIZED |
| PMEG.utg000236l.47 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| PMEG.utg000236l.48 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| PMEG.utg000236l.49 | B-CELL TRANSLOCATION GENE |
| PMEG.utg000236l.5 | TETRASPANIN |
| PMEG.utg000236l.50 | TETRASPANIN |
| PMEG.utg000236l.51 | |
| PMEG.utg000236l.52 | |
| PMEG.utg000236l.53 | |
| PMEG.utg000236l.54 | |
| PMEG.utg000236l.56 | CYSTATHIONINE BETA-SYNTHASE |
| PMEG.utg000236l.57 | TYROSINE-PROTEIN KINASE RECEPTOR |
| PMEG.utg000236l.58 | TRANSMEMBRANE PROTEIN 79 |
| PMEG.utg000236l.6 | TETRASPANIN |
| PMEG.utg000236l.7 | NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT |
| PMEG.utg000236l.8 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000236l.9 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000237l.1 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| PMEG.utg000237l.10 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000237l.11 | UBIQUITINATION FACTOR E4 |
| PMEG.utg000237l.12 | SOLUTE CARRIER FAMILY 35 |
