The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000237l.13 | COILED-COIL DOMAIN-CONTAINING PROTEIN 150 |
| PMEG.utg000237l.14 | SEPIAPTERIN REDUCTASE |
| PMEG.utg000237l.15 | LD39211P |
| PMEG.utg000237l.16 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| PMEG.utg000237l.17 | GMP SYNTHASE-RELATED |
| PMEG.utg000237l.18 | |
| PMEG.utg000237l.19 | O-ACYLTRANSFERASE |
| PMEG.utg000237l.2 | WD40 REPEAT PROTEIN |
| PMEG.utg000237l.3 | NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B |
| PMEG.utg000237l.4 | HILLARIN |
| PMEG.utg000237l.5 | TRANSLOCATION PROTEIN SEC62 |
| PMEG.utg000237l.6 | SOLUTE CARRIER FAMILY 2 |
| PMEG.utg000237l.7 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| PMEG.utg000237l.8 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| PMEG.utg000237l.9 | |
| PMEG.utg000239l.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 |
| PMEG.utg000239l.10 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| PMEG.utg000239l.11 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| PMEG.utg000239l.12 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| PMEG.utg000239l.13 | UNCHARACTERIZED |
| PMEG.utg000239l.14 | RESISTANCE TO INHIBITORS OF CHOLINESTERASE PROTEIN 3 RIC3 |
| PMEG.utg000239l.15 | |
| PMEG.utg000239l.16 | RIKEN CDNA 9930021J03 GENE |
| PMEG.utg000239l.17 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000239l.18 | HL07962P-RELATED |
| PMEG.utg000239l.2 | UNCHARACTERIZED |
| PMEG.utg000239l.20 | |
| PMEG.utg000239l.21 | CHROMOSOME 28 C12ORF29 HOMOLOG |
| PMEG.utg000239l.22 | ZINC FINGER PROTEIN |
| PMEG.utg000239l.23 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| PMEG.utg000239l.24 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| PMEG.utg000239l.25 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| PMEG.utg000239l.26 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000239l.27 | RUVB-RELATED REPTIN AND PONTIN |
| PMEG.utg000239l.28 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| PMEG.utg000239l.29 | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 |
| PMEG.utg000239l.3 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
| PMEG.utg000239l.30 | ATILLA, ISOFORM B-RELATED-RELATED |
| PMEG.utg000239l.4 | TNF RECEPTOR ASSOCIATED FACTOR |
| PMEG.utg000239l.5 | DESTABILASE-RELATED |
| PMEG.utg000239l.6 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| PMEG.utg000239l.7 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| PMEG.utg000239l.8 | NUCLEOPORIN NUP35 |
| PMEG.utg000239l.9 | PROTEIN KINASE PKN/PRK1, EFFECTOR |
| PMEG.utg000240l.1 | RECEPTOR TRANSPORTING PROTEIN |
| PMEG.utg000240l.2 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| PMEG.utg000240l.4 | |
| PMEG.utg000240l.5 | OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEIN |
| PMEG.utg000240l.6 | OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEIN |
| PMEG.utg000241l.1 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
