The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000226l.17 | EG:80H7.2 PROTEIN |
| PMEG.utg000226l.18 | EG:80H7.2 PROTEIN |
| PMEG.utg000226l.19 | SOLUTE CARRIER FAMILY 17 |
| PMEG.utg000226l.2 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
| PMEG.utg000226l.20 | INNER KINETOCHORE SUBUNIT MAL2 |
| PMEG.utg000226l.21 | UNCHARACTERIZED |
| PMEG.utg000226l.22 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| PMEG.utg000226l.23 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| PMEG.utg000226l.24 | AGAP001331-PA-RELATED |
| PMEG.utg000226l.25 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
| PMEG.utg000226l.26 | NITRIC OXIDE SYNTHASE-RELATED |
| PMEG.utg000226l.27 | DRAB11-RELATED |
| PMEG.utg000226l.28 | |
| PMEG.utg000226l.29 | ORGANIC ANION TRANSPORTER |
| PMEG.utg000226l.3 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
| PMEG.utg000226l.30 | CADHERIN-23 |
| PMEG.utg000226l.4 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
| PMEG.utg000226l.5 | MYOTROPHIN |
| PMEG.utg000226l.6 | PHOSPHATE TRANSPORTER |
| PMEG.utg000226l.7 | C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180 |
| PMEG.utg000226l.9 | WD REPEAT-CONTAINING PROTEIN 48 |
| PMEG.utg000227l.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000227l.10 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| PMEG.utg000227l.11 | PHOSPHATIDYLINOSITOL SYNTHASE |
| PMEG.utg000227l.12 | HISTONE ACETYLTRANSFERASE |
| PMEG.utg000227l.13 | 3'-5' EXORIBONUCLEASE CSL4-RELATED |
| PMEG.utg000227l.14 | SIMILAR TO HYPOTHETICAL PROTEIN |
| PMEG.utg000227l.15 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
| PMEG.utg000227l.16 | UNCHARACTERIZED |
| PMEG.utg000227l.17 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
| PMEG.utg000227l.18 | ANTIGEN KI-67-LIKE PROTEIN |
| PMEG.utg000227l.19 | SET DOMAIN PROTEINS |
| PMEG.utg000227l.2 | ATP-DEPENDENT RNA AND DNA HELICASE |
| PMEG.utg000227l.20 | DDB1- AND CUL4-ASSOCIATED FACTOR 10 |
| PMEG.utg000227l.21 | TETRASPANIN |
| PMEG.utg000227l.22 | MRNA-CAPPING ENZYME |
| PMEG.utg000227l.23 | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN |
| PMEG.utg000227l.24 | |
| PMEG.utg000227l.25 | NARDILYSIN |
| PMEG.utg000227l.26 | G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000227l.27 | SH2 DOMAIN CONTAINING PROTEIN |
| PMEG.utg000227l.29 | PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3 |
| PMEG.utg000227l.3 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| PMEG.utg000227l.30 | TUDOR DOMAIN CONTAINING PROTEIN |
| PMEG.utg000227l.31 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| PMEG.utg000227l.32 | PROTEIN EVA-1 |
| PMEG.utg000227l.5 | C20ORF30 PROTEIN |
| PMEG.utg000227l.6 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| PMEG.utg000227l.7 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| PMEG.utg000227l.8 | BETA-1,4-GALACTOSYLTRANSFERASE |
