The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000243l.70 | 2-5A-DEPENDENT RIBONUCLEASE |
| PMEG.utg000243l.71 | SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F |
| PMEG.utg000243l.72 | UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 |
| PMEG.utg000243l.73 | UROCANATE HYDRATASE |
| PMEG.utg000243l.74 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
| PMEG.utg000243l.75 | BTB/POZ DOMAIN-CONTAINING |
| PMEG.utg000243l.76 | CHITIN BINDING PERITROPHIN-A |
| PMEG.utg000243l.77 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.78 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.79 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.8 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.80 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.81 | - |
| PMEG.utg000243l.82 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.83 | GLUTATHIONE S-TRANSFERASE |
| PMEG.utg000243l.84 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| PMEG.utg000243l.85 | |
| PMEG.utg000243l.86 | UNCHARACTERIZED |
| PMEG.utg000243l.87 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| PMEG.utg000243l.88 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| PMEG.utg000243l.89 | NUCLEAR RESPIRATORY FACTOR 1 |
| PMEG.utg000243l.9 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8 |
| PMEG.utg000243l.90 | PROTEIN SSUH2 HOMOLOG |
| PMEG.utg000243l.91 | |
| PMEG.utg000243l.92 | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN |
| PMEG.utg000243l.93 | USP DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000243l.94 | |
| PMEG.utg000243l.95 | |
| PMEG.utg000244l.1 | NUDIX T16 FAMILY MEMBER |
| PMEG.utg000244l.2 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
| PMEG.utg000244l.3 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
| PMEG.utg000244l.4 | CCAAT DISPLACEMENT PROTEIN-RELATED |
| PMEG.utg000244l.5 | CCAAT DISPLACEMENT PROTEIN-RELATED |
| PMEG.utg000244l.6 | NUCLEOPORIN NUP84-RELATED |
| PMEG.utg000244l.7 | NUDIX T16 FAMILY MEMBER |
| PMEG.utg000244l.8 | SIGMA INTRACELLULAR RECEPTOR 2 |
| PMEG.utg000245l.1 | CYTOCHROME P450 508A4-RELATED |
| PMEG.utg000245l.2 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11 |
| PMEG.utg000245l.3 | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE |
| PMEG.utg000246l.1 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| PMEG.utg000247l.1 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| PMEG.utg000247l.10 | SUGAR KINASE |
| PMEG.utg000247l.11 | |
| PMEG.utg000247l.12 | |
| PMEG.utg000247l.13 | |
| PMEG.utg000247l.14 | ALDO/KETO REDUCTASE |
| PMEG.utg000247l.15 | ALDO/KETO REDUCTASE |
| PMEG.utg000247l.16 | CALCIUM BINDING PROTEINS |
| PMEG.utg000247l.17 | CALPAIN |
| PMEG.utg000247l.18 | CALPAIN |
