The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000247l.19 | CALPAIN |
PMEG.utg000247l.2 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
PMEG.utg000247l.20 | |
PMEG.utg000247l.21 | GH17980P-RELATED |
PMEG.utg000247l.22 | ADP RIBOSYLATION FACTOR-RELATED |
PMEG.utg000247l.23 | APONTIC |
PMEG.utg000247l.24 | SOLUTE CARRIER FAMILY 22 MEMBER |
PMEG.utg000247l.25 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
PMEG.utg000247l.3 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
PMEG.utg000247l.4 | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000247l.6 | |
PMEG.utg000247l.7 | |
PMEG.utg000247l.8 | TELOMERASE REVERSE TRANSCRIPTASE |
PMEG.utg000247l.9 | |
PMEG.utg000248l.1 | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER |
PMEG.utg000248l.10 | |
PMEG.utg000248l.11 | |
PMEG.utg000248l.12 | C-TYPE LECTIN SUPERFAMILY MEMBER |
PMEG.utg000248l.13 | VACUOLAR ATP SYNTHASE SUBUNIT AC39 |
PMEG.utg000248l.14 | ADENOSYLHOMOCYSTEINASE |
PMEG.utg000248l.2 | |
PMEG.utg000248l.3 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
PMEG.utg000248l.4 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
PMEG.utg000248l.5 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
PMEG.utg000248l.6 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
PMEG.utg000248l.7 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
PMEG.utg000248l.8 | TYROSINE-PROTEIN KINASE |
PMEG.utg000248l.9 | CYSTEINE PROTEASE FAMILY C1-RELATED |
PMEG.utg000249l.1 | TRANSMEMBRANE CHANNEL-RELATED |
PMEG.utg000249l.10 | CARBOXYLESTERASE |
PMEG.utg000249l.11 | CARBOXYLESTERASE |
PMEG.utg000249l.12 | PROTEIN FAM220A |
PMEG.utg000249l.13 | D-ERYTHRULOSE REDUCTASE |
PMEG.utg000249l.14 | UNCHARACTERIZED |
PMEG.utg000249l.15 | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 |
PMEG.utg000249l.16 | UNCHARACTERIZED |
PMEG.utg000249l.17 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000249l.18 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000249l.19 | CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000249l.2 | TRANSMEMBRANE CHANNEL-RELATED |
PMEG.utg000249l.20 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000249l.21 | RASSF |
PMEG.utg000249l.22 | TRYPSIN-RELATED |
PMEG.utg000249l.23 | OPSIN |
PMEG.utg000249l.24 | 60S RIBOSOMAL PROTEIN L3-RELATED |
PMEG.utg000249l.25 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
PMEG.utg000249l.26 | KEREN-RELATED |
PMEG.utg000249l.27 | |
PMEG.utg000249l.28 | SYNTAXIN |
PMEG.utg000249l.29 | FRINGE-RELATED |