About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03176-
Paelopatides03177-
Paelopatides03178-
Paelopatides03180-
Paelopatides03181N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides03182PEPTIDASE
Paelopatides03183-
Paelopatides03184TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides03185CHONDROITIN SYNTHASE
Paelopatides03186REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03187PROTEASE M14 CARBOXYPEPTIDASE
Paelopatides03188PROTEIN CBG26694
Paelopatides03189PROTEIN CBG26694
Paelopatides03190PROTEASE M14 CARBOXYPEPTIDASE
Paelopatides03191SH3 DOMAIN-CONTAINING
Paelopatides03192-
Paelopatides03193-
Paelopatides03194MYOSIN REGULATORY LIGHT CHAIN 2
Paelopatides03195-
Paelopatides03196-
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