About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03096PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03097-
Paelopatides03098-
Paelopatides03099-
Paelopatides03100EXPRESSED PROTEIN
Paelopatides03101-
Paelopatides03102TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides03103-
Paelopatides03104PROTEIN CBG26694
Paelopatides03105EH DOMAIN
Paelopatides03106ENDONUCLEASE-RELATED
Paelopatides03107ENZYMATIC POLYPROTEIN-RELATED
Paelopatides03108TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides03109-
Paelopatides03110-
Paelopatides03111-
Paelopatides03112PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03113CYTOCHROME C OXIDASE POLYPEPTIDE VIA
Paelopatides03114SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03115SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
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