About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02992HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides02993TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides02994-
Paelopatides02995-
Paelopatides02996CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides02997CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides02998FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03001-
Paelopatides03002-
Paelopatides03003CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03004-
Paelopatides03005LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Paelopatides03006VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides03007-
Paelopatides03008-
Paelopatides03009-
Paelopatides03010CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03011CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03012-
Paelopatides03013REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
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