About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02946PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides02947ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides02950ENDONUCLEASE-RELATED
Paelopatides02951-
Paelopatides02952PROTEIN CBG26694
Paelopatides02953PROTEIN CBG26694
Paelopatides02954PROTEIN CBG26694
Paelopatides02955MACROGLOBULIN / COMPLEMENT
Paelopatides02956MACROGLOBULIN / COMPLEMENT
Paelopatides02957TRANSPOSON
Paelopatides02958REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02959-
Paelopatides02960MATRIN 3/NUCLEAR PROTEIN 220-RELATED
Paelopatides02961CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Paelopatides02962ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides02963-
Paelopatides02964GAMMA GLUTAMYL TRANSPEPTIDASE
Paelopatides02965-
Paelopatides02966-
Paelopatides02967-
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