About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03014FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03015FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03016PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides03017PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides03018RETROTRANSPOSON
Paelopatides03019ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides03020-
Paelopatides03021-
Paelopatides03022MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides03023REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03024-
Paelopatides03025-
Paelopatides03026REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03027-
Paelopatides03028ALKALINE PHOSPHATASE
Paelopatides03029ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides03030ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides03031LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides03032-
Paelopatides03033ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
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