About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03056UNCHARACTERIZED
Paelopatides03057NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides03058CYTOKINE RECEPTOR
Paelopatides03059-
Paelopatides03060REVERSE TRANSCRIPTASES
Paelopatides03061RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides03062ATP-DEPENDENT DNA HELICASE
Paelopatides03063ATP-DEPENDENT DNA HELICASE
Paelopatides03064ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides03065FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03066-
Paelopatides0306730S RIBOSOMAL PROTEIN S16
Paelopatides03068-
Paelopatides03069ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03070NICOTINATE PHOSPHORIBOSYLTRANSFERASE
Paelopatides03071-
Paelopatides03072-
Paelopatides03073CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03074CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03075-
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