About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03116CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
Paelopatides03117ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 61
Paelopatides03118POLYCYSTIN-1
Paelopatides03119POLYCYSTIN-1
Paelopatides03120KREMEN PROTEIN
Paelopatides03121TRANSPOSON
Paelopatides03122-
Paelopatides03123HELICASE WITH DEATH DOMAIN-RELATED
Paelopatides03124REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03125-
Paelopatides03126ES1 PROTEIN HOMOLOG, MITOCHONDRIAL
Paelopatides03127-
Paelopatides03128LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
Paelopatides03129-
Paelopatides03130-
Paelopatides03131-
Paelopatides03132RETROTRANSPOSON
Paelopatides03133ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides03134ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides03135REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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