About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03156PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03157-
Paelopatides03158GTP-BINDING
Paelopatides03159PROTEIN CBG26694
Paelopatides03160PROTEIN CBG26694
Paelopatides03161PROMININ PROM PROTEIN
Paelopatides03162-
Paelopatides03163RAN GTPASE
Paelopatides03164-
Paelopatides03165METHYLTRANSFERASE-RELATED
Paelopatides03166-
Paelopatides03167RAN GTPASE
Paelopatides03168-
Paelopatides03169STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
Paelopatides03170EXS-RELATED PROTEIN
Paelopatides03171PROTEIN CBG26694
Paelopatides03172-
Paelopatides03173TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides03174POL PROTEIN
Paelopatides03175-
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