About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_23570-1.11KREMEN PROTEIN
Bpl_scaf_23570-1.5KREMEN PROTEIN
Bpl_scaf_23576-1.12METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_23576-1.13BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_23576-1.16UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Bpl_scaf_23576-1.18
Bpl_scaf_23589-0.8
Bpl_scaf_23589-1.24TUBULIN
Bpl_scaf_236-0.2
Bpl_scaf_23600-0.2N-LYSINE METHYLTRANSFERASE KMT5A
Bpl_scaf_23605-0.0ROLLING PEBBLES, ISOFORM B
Bpl_scaf_23605-1.1
Bpl_scaf_23605-1.11HOMEOBOX PROTEIN EMX-RELATED
Bpl_scaf_23605-1.2
Bpl_scaf_23605-1.9
Bpl_scaf_23613-0.0PUTATIVE-RELATED
Bpl_scaf_23619-1.12RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_23619-1.13
Bpl_scaf_23619-1.9CYTOCHROME P450
Bpl_scaf_23624-0.4
Bpl_scaf_23624-0.5BA1-643
Bpl_scaf_23624-1.5
Bpl_scaf_23629-0.1
Bpl_scaf_23633-0.11G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_23633-0.14
Bpl_scaf_23633-0.2NEUROPEPTIDE Y RECEPTOR
Bpl_scaf_23633-0.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_23633-1.16
Bpl_scaf_23633-1.17TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Bpl_scaf_23633-1.7COILED-COIL DOMAIN-CONTAINING PROTEIN 40
Bpl_scaf_23633-1.9PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Bpl_scaf_23634-0.2RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_23635-0.22-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_23636-0.1
Bpl_scaf_23638-0.0
Bpl_scaf_23638-0.10
Bpl_scaf_23638-1.12
Bpl_scaf_23638-1.26PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_23638-1.32
Bpl_scaf_23638-1.8PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_23641-0.0
Bpl_scaf_2365-0.12
Bpl_scaf_2365-0.14
Bpl_scaf_2365-0.5
Bpl_scaf_2365-1.11CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_2365-1.13
Bpl_scaf_2365-1.24REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_2365-1.25CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_2365-1.26
Bpl_scaf_2365-1.27
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