About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_007552-T1ENDONUCLEASE RELATED
OS493_007553-T1
OS493_007554-T1
OS493_007555-T1GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
OS493_007556-T1MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
OS493_007557-T1PURPLE ACID PHOSPHATASE
OS493_007558-T1PURPLE ACID PHOSPHATASE
OS493_007559-T1PURPLE ACID PHOSPHATASE
OS493_007560-T1-
OS493_007561-T1-
OS493_007562-T1SERINE-THREONINE PROTEIN KINASE
OS493_007563-T1
OS493_007564-T1
OS493_007565-T1
OS493_007566-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007567-T1SCAVENGER RECEPTOR DOMAIN-CONTAINING
OS493_007568-T1SCAVENGER RECEPTOR DOMAIN-CONTAINING
OS493_007569-T1
OS493_007570-T1
OS493_007571-T1
OS493_007572-T1
OS493_007573-T1GEM-ASSOCIATED PROTEIN 6
OS493_007575-T1SOLUTE CARRIER FAMILY 35 MEMBER B
OS493_007576-T1TAZ PROTEIN TAFAZZIN
OS493_007577-T1
OS493_007578-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007579-T1
OS493_007580-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007581-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007582-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007583-T1
OS493_007584-T1
OS493_007585-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007586-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007587-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_007588-T1
OS493_007589-T1
OS493_007590-T1
OS493_007591-T1
OS493_007592-T1SYNTROPHIN
OS493_007593-T1XK-RELATED PROTEIN
OS493_007594-T1
OS493_007595-T1L-ASPARAGINASE
OS493_007596-T1INOSITOL MONOPHOSPHATASE
OS493_007597-T1ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
OS493_007598-T1
OS493_007599-T1
OS493_007600-T1
OS493_007601-T1HMG DOMAIN-CONTAINING PROTEIN 3
OS493_007602-T1
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