About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 134 135 136 137 138 139 140 141 142 143 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_002980-T1WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
OS493_002981-T1WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
OS493_002982-T1TRANSLATION FACTOR
OS493_002983-T1XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED
OS493_002984-T1MYOSIN HEAVY CHAIN, NON-MUSCLE
OS493_002985-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_002986-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_002987-T1-
OS493_002988-T1MATRIX METALLOPROTEINASE
OS493_002989-T1MATRIX METALLOPROTEINASE
OS493_002990-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_002991-T1PROTEIN SIDEKICK
OS493_002992-T1PROTEIN SIDEKICK
OS493_002993-T1TWEETY-RELATED
OS493_002994-T1-
OS493_002995-T1-
OS493_002996-T1-
OS493_002997-T1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
OS493_002998-T1C2 DOMAIN-CONTAINING PROTEIN
OS493_002999-T1CYTOSOLIC PHOSPHOLIPASE A2
TOP