About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_007148-T1ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
OS493_007149-T1
OS493_007150-T1ARMADILLO-TYPE FOLD-RELATED
OS493_007151-T1ARMADILLO-TYPE FOLD-RELATED
OS493_007152-T1
OS493_007153-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
OS493_007155-T1
OS493_007157-T1CUB DOMAIN-CONTAINING PROTEIN
OS493_007158-T1
OS493_007159-T1EXPRESSED PROTEIN
OS493_007160-T1MONOCARBOXYLATE TRANSPORTER
OS493_007161-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_007162-T1CUB DOMAIN-CONTAINING PROTEIN
OS493_007163-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_007164-T1
OS493_007166-T1OS06G0237300 PROTEIN
OS493_007167-T1
OS493_007169-T1DIHYDROOROTASE-RELATED
OS493_007170-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_007171-T1DIHYDROOROTASE-RELATED
OS493_007172-T1DIHYDROOROTASE-RELATED
OS493_007173-T1
OS493_007174-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_007175-T1FAS-ASSOCIATED PROTEIN
OS493_007176-T1ACYL-COA DEHYDROGENASE
OS493_007177-T1ACYL-COA DEHYDROGENASE
OS493_007178-T1
OS493_007179-T1
OS493_007180-T1
OS493_007181-T1
OS493_007182-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_007183-T1SCP160
OS493_007184-T1
OS493_007185-T1DNA-DIRECTED RNA POLYMERASE III
OS493_007186-T1PHOSPHATIDATE CYTIDYLYLTRANSFERASE
OS493_007187-T1PROLIFERATING CELL NUCLEAR ANTIGEN
OS493_007188-T1AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
OS493_007189-T1
OS493_007190-T140S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11
OS493_007191-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_007192-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007194-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007196-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007197-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007198-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007199-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007201-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007202-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_007203-T1
OS493_007206-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
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